Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2556 ATGATGGACTACTCGCACAAGCAACTATTTCCCCTCTTATGTCTTCCCCTAGTACTTCTCTCAGGACATATGATGGGGCTACAAACTGAGGCTCGGTTGCAAcgtgataaaatgaattatcccCCGAAAATGTTGTTCGTTTTTGGGGACTCATATGCTGATACTGGGAACACGAGAATAAATCAACCTGGTTCGTGGAAACAGCCTTATGGCATCACTTTTCCCGGAAAACCAGCCGGTAGATTCTCCGACGGTAGAGTTCTAACCGACTACATTGCAAAGTATTTGAGACTCAAATCTCCAGTTCCCTATAAATTTAGGAAACTgatgcaacaacatttgaaaTACGGGATGAATTTCGCATTTGGTGGTACCGGTGTCTTTGACACATCCTCCAAAAACCCAAATATGACAATTCAAATCGATTTCTTCAAGCAGTTGATCAAAGAAAATGTATACACCACCTCAGATCTCAGCAACTCAGTGGCCCTTGTCTCCGTCGCTGGAAATGATTACAATCACTACATGACCACAAACGGCTCTATTGAGGGTTTCCCGTCTTTCATCGCCTCAGTGGTTAATCAAACTGCCACCAACTTGCTTCGCATCCAAAGGTTGGGAGTGAGGAAAATTGTTGTGGGTGGTCTACAACCGCTTGGATGTCTTCCTAGTACCACTTTCCAATCCTCATTCAGACAATGTAATAGTACCTCCAACGACCTCGTAGTTCTCCACAACAACCTGTTGAACCAAGCTGTGACCAAGTTGAACCAACAAACCAAGGATCACTCCACCTTCATAGTTCTTGACCTTTTCGACACTTTCATGTCGGTGCTGAACCACCCATCTACCAATAACATTAAGGACCAGCTCAAGCCTTGTTGCGTTGGGTTAAGCAGCCAGCATTTTTGTGGGAGCGTGGACGAGAACAATGTTAAGAAATACAAGGTTTGTGACCATCCCAAATCAGCTTTCTTTTGGGATCTCTTGCACCCAACTCAAGCAGGTTGGCATGCCGTGTATAACAAGTTGCAAACGACTAGTGCTCTTCATCAACTCCGTTACTAG 1068 0.4316 MMDYSHKQLFPLLCLPLVLLSGHMMGLQTEARLQRDKMNYPPKMLFVFGDSYADTGNTRINQPGSWKQPYGITFPGKPAGRFSDGRVLTDYIAKYLRLKSPVPYKFRKLMQQHLKYGMNFAFGGTGVFDTSSKNPNMTIQIDFFKQLIKENVYTTSDLSNSVALVSVAGNDYNHYMTTNGSIEGFPSFIASVVNQTATNLLRIQRLGVRKIVVGGLQPLGCLPSTTFQSSFRQCNSTSNDLVVLHNNLLNQAVTKLNQQTKDHSTFIVLDLFDTFMSVLNHPSTNNIKDQLKPCCVGLSSQHFCGSVDENNVKKYKVCDHPKSAFFWDLLHPTQAGWHAVYNKLQTTSALHQLRY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2556 355 PANTHER OSJNBB0059K02.9 PROTEIN 3 355 - -
Ssu7g2556 355 SUPERFAMILY SGNH hydrolase 42 344 - -
Ssu7g2556 355 CDD SGNH_plant_lipase_like 45 344 IPR035669 -
Ssu7g2556 355 Gene3D SGNH hydrolase 36 350 IPR036514 -
Ssu7g2556 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 355 - -
Ssu7g2556 355 Pfam GDSL-like Lipase/Acylhydrolase 45 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2556 Ssu-Chr7 50416625 50420592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2556 45 340 Pollen Coat Proteome AT1G75930 29.560 2.89e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2556 - - gmx:100789208 587.415