Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2554 ATGGAACTTCCAACTTTAGCTACCCCCTCTCCGTTGCAGCTCTCCAGCAACACCTGTTTCGCTTCTCTACTCCTCTCCCTcaccctcctcctcctcctcgtAGCAATCGCGCGTCTCTCTCCTCGTTTTCCCCGAAAGAGCATCGTCCTCTGCAGGCTGCGAAACGTGCCAGGCCTACCTCACTTCAAGCTGGTCGAAGCACTTCGACAACCTGTGCGACTGGTACGCGCACCTCCTCCGGAACTCGCCCGGGAAGACCATCCACATCCACGTGCTGCGCAACACGATCACCGCCAACGCGGAGAACGTGGAGCACATCCTCAAGACGAGGTTCGAGAACTTCCCCAAGGGGAAACCCTTCTCCGCGATCCTCGGCGACTTCCTCGGCCGCGGAATCTTCAACGTCGACGGCGAGCCGTGGCGGTTCCAGAAGAAGATGGCGAGCCTGGAGCTCAGCAAGCGCTCCATAACCTCCTTCGCCTTCGAGGTCGTCAACAGCGAAATCCACCACCGCCTCGTCCCGCTCCTCGCCTCGACCCGGAGCGGCGCCGCGGTGGACCTGCAGGACGTGTTTCGGAGATTCTCTTTCGACAGCATTTGCAGATTCTCCTTCGGGCTGGACCCCGAGTGTCTGGAGAAGTCGCCGCCCATGTCGGAGTTCGCGGCTTCGTTCGACCTGGCGTCGAAGCTGTCCGCGGAGAGGGCCATGGCGGTGTCGCCCTACGTTTGGAAGTGAAGAGGCTGCTCAACGTGGGGAGCGAGAGGCGGCTTAGGGAAGCCGTTAGGGTGATCGACGTGTTGGCGAAAGCGGTCATAAAGCGAAGGCGCGAAATGGGGTTCTCCGACCGCAAGGACTTGTTGTCGCGATTCATGGGCACCGTCCACGAGGACGCGTATTTACGAGACATTGTTGTAAGCTTCTTGTTGGCGGGTCGTGACACCGTCGCTTCGGCGCTCACGAGTTTCTTTTGGCTTCTGGGGAAGCACCCTGAAGTGGAATCGGAGATCCGCGCGGAGGCGGACCGAGTAATTGGGCCCCACAAGGACCTCACAAGCTTCGAACAGCTCAAGCAGTTGCACTATTTGCAAGCGGCAACGCATGAAAGTATGAGGCTGTTTCCACCGATTCAGTTTGACTCCAAGTTTTGCCTGGAGGACGATGTGTTACCCGATGGGACAAAGGTCGAGAGCGGAACTAGGGTTACTTACCATCCCTACGCGATGGGGAGGTTGGAGGAAATATGGGGGAGCGATTGTTTGGAGTTTAGGCCACAAAGGTGGTTGAAGGATGGGGTGTTTCACCCTAAGAATCCCTTCAAGTACCCGGTTTTTCAAGCGGGGTTGAGGGTGTGTATGGGCAAGGAAATGGCTTTGATGGAGCTCAAGTGTGTGGCGCTTTCGCTGCTGAGGAAGTTCCACATCGAACTGGTGGCACCGGCGAGTGGTAACCCTCGGTTCTCTCCTGGACTCACTGCCACTTTTAGTTTTGGCCTTCCCGTCATGCTTCGTGAAAGAGGAACAACCGCCGAACCCTCTCGTTGA 1542 0.5681 MELPTLATPSPLQLSSNTCFASLLLSLTLLLLLVAIARLSPRFPRKSIVLCRLRNVPGLPHFKLVEALRQPVRLVRAPPPELAREDHPHPRAAQHDHRQRGERGAHPQDEVRELPQGETLLRDPRRLPRPRNLQRRRRAVAVPEEDGEPGAQQALHNLLRLRGRQQRNPPPPRPAPRLDPERRRGGPAGRVSEILFRQHLQILLRAGPRVSGEVAAHVGVRGFVRPGVEAVRGEGHGGVALRLEVKRLLNVGSERRLREAVRVIDVLAKAVIKRRREMGFSDRKDLLSRFMGTVHEDAYLRDIVVSFLLAGRDTVASALTSFFWLLGKHPEVESEIRAEADRVIGPHKDLTSFEQLKQLHYLQAATHESMRLFPPIQFDSKFCLEDDVLPDGTKVESGTRVTYHPYAMGRLEEIWGSDCLEFRPQRWLKDGVFHPKNPFKYPVFQAGLRVCMGKEMALMELKCVALSLLRKFHIELVAPASGNPRFSPGLTATFSFGLPVMLRERGTTAEPSR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2554 513 MobiDBLite consensus disorder prediction 80 128 - -
Ssu7g2554 513 PANTHER CYTOCHROME P450 244 499 - -
Ssu7g2554 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 244 499 - -
Ssu7g2554 513 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 Pfam Cytochrome P450 253 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 SUPERFAMILY Cytochrome P450 248 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 MobiDBLite consensus disorder prediction 80 187 - -
Ssu7g2554 513 Gene3D Cytochrome P450 233 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2554 513 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2554 Ssu-Chr7 50294559 50296100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2554 241 506 Cytochrome P450 AT2G27690 58.088 1.59e-105 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2554 K20624 - gmx:100784058 459.529