Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2551 ATGGGAGAGCTGCCAGTGGCTAGAACCTACGCCCCGGAAGACCATCACCACAACTTGCTGGCTACTGCAATTGGAGACCGGCAGTTAGCCACAGAGTACAAAATACACAGCTATGGAAAGAGCTTCAACGGATTCGTTGCACAACTTTTGCCACATGAAGCAGAGAAATTACTAGAGGAGGACAACGTGGTATCTGTTTTTCCAAATACACACAATAGATTACATACGACAAGGTCATGGAAGTTTCTGGGATTGCCCCTAAAACTGAACAGACATTCTAATGTGGAGAGCGATATCATCGTCGGTCTGTTAGACACAgGAATTTCGCTTGATTGCCCAAGTTTCAACGATAGGGGGTATGGGCCTCCCCCACGCACATGGAAGGGCAAATGTGTGACTGGAGCCAATTTCACCAGTTGCAACAACAAGGTGATCGGAGCAAAATACTTCAACCTACAAAACGCGCCGGTGTCGAACCTCAGTCCGGCGGACGACGAGGGGCACGGCACTCACACAGCCTCGACGGCGGCGGGGGTGGCGGTGAGGGGTGCCAGCCTGGCCGGAATAGGGGTCGGGACGGCGCGGGGCGGGGTGGCGCGAGCCCGCATAGCGATGTACAAAGTGTGTTGGAGCAGTTGGGGGTGCAGCGACATGGACTTGCTGGCGGCGTTCGACGAGGCCATAGCGGACGGCGTGAACCTCATATCCGTGTCTCTGGGAGGGACGCCCAGGAAGTTCTTCAGCGACCCAATGGCCATTGGAGCGTTCCATGCCGTCAAGAGAGGGATTCTCACCGCTTGCTCCGCCGGCAACAATGGCCCTTCCACCATGACCGTTGAAAACGTCGCCCCTTGGATTTTGACCGTCGCCGCCTCCAACACCGATAGGCACTTCACCACCGTCGTGGACCTCGGCAACGGCAAGAAACCTGCGGGAATGTCCATTAATACCTTTACCCCTGAGAAAAAGATGTACCCACTGATTAGTGGAGCCCGTGCTTCCAACGTTAGCGGAGACGGCTATGGCAATGCCAGTGCATGTGATTATGGGAGTCTAAGCAAGGAGAAGGTAATGGGCAAGATAGTGTACTGCCTTGGCACGGGCAACAAGGAATTCATAATCAAAGAACTAAGAGGAGCAGGCATCATCGTAGGTGTTTCAGACCAAACAGACTattccaccaccactactattcCCGGTGTCTATGTTGATGCCAACACTGCTGGCAAATCCATTGACCTTTACATCAATTCCACCAAGAATGCTCAAGCTGTTATACACAAGACCACAAGTACAAGAGGCCCTGCTCCTTATGTTGCTTCTTTCTCATCTAGAGGTCCTCAATACATCACCTTAAACATCCTAAAGCCTGACTTGAGTGCTCCGGGAGTGGACATTCTAGCTGGATATTCTAAATTAGCAACACTAACAGGGGACCCTGAAGACAACCGTCGAAACGTTTTTAACATATTGTCAGGAACATCTATGGCCTGTCCCCatgttgctgctgctgctgcatATGTCAAATCGTTCCATCCTGATTGGAGTCCTGCTGCAATTAAATCTGCTCTCATGACCACTGCCATTCCCATGAGAATCAAAGACAACACAGCAGAGCTAGGATCAGGGTCAGGACAGATCAACCCAGTGAGAGCATTGGATCCGGGCTTACTTTACAACGTTAGTATGGACTCCTACATTGCATTCCTATGCAAAGAAGGCTACAACAGCAGCAGCATTGGAATACTAATTGGCACCAAAGGCTTCAATTGCTCCAGCATTGGCCCTCCACAAGGCACTGATGGAATCAACTACCCTTCCATGCATACCCAGATCATACCTTCCAATTCTAGCATTTCTGCAATCTTTTATCGGAGTGTGACCAATGTAGGATTTGGAAACTCAACTTACAAGGCCAAAGTCACAGCACCCAAGAAGGGTCTTTCCATTGAGGTTATCCCAGACACATTGAAGTTTAGTGGGGTGAACCAAGAGCTGTCGTTCAAGGTTGTGCTGAAGGGGCCTCCAATGCCTAAGGAGAGAAAGATATTATCGGCATCACTCGAATGGAATGACTCTAAACACAGGGTAAGAAGCCCCATAGTTGTCTATAAACCGACCTTGTGA 2127 0.4927 MGELPVARTYAPEDHHHNLLATAIGDRQLATEYKIHSYGKSFNGFVAQLLPHEAEKLLEEDNVVSVFPNTHNRLHTTRSWKFLGLPLKLNRHSNVESDIIVGLLDTGISLDCPSFNDRGYGPPPRTWKGKCVTGANFTSCNNKVIGAKYFNLQNAPVSNLSPADDEGHGTHTASTAAGVAVRGASLAGIGVGTARGGVARARIAMYKVCWSSWGCSDMDLLAAFDEAIADGVNLISVSLGGTPRKFFSDPMAIGAFHAVKRGILTACSAGNNGPSTMTVENVAPWILTVAASNTDRHFTTVVDLGNGKKPAGMSINTFTPEKKMYPLISGARASNVSGDGYGNASACDYGSLSKEKVMGKIVYCLGTGNKEFIIKELRGAGIIVGVSDQTDYSTTTTIPGVYVDANTAGKSIDLYINSTKNAQAVIHKTTSTRGPAPYVASFSSRGPQYITLNILKPDLSAPGVDILAGYSKLATLTGDPEDNRRNVFNILSGTSMACPHVAAAAAYVKSFHPDWSPAAIKSALMTTAIPMRIKDNTAELGSGSGQINPVRALDPGLLYNVSMDSYIAFLCKEGYNSSSIGILIGTKGFNCSSIGPPQGTDGINYPSMHTQIIPSNSSISAIFYRSVTNVGFGNSTYKAKVTAPKKGLSIEVIPDTLKFSGVNQELSFKVVLKGPPMPKERKILSASLEWNDSKHRVRSPIVVYKPTL 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2551 708 PANTHER CUCUMISIN PROTEIN 1 705 - -
Ssu7g2551 708 CDD Peptidases_S8_3 74 529 IPR034197 -
Ssu7g2551 708 PRINTS Subtilisin serine protease family (S8) signature 164 177 IPR015500 -
Ssu7g2551 708 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Ssu7g2551 708 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Ssu7g2551 708 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 101 111 IPR023827 -
Ssu7g2551 708 Pfam Peptidase inhibitor I9 14 75 IPR010259 -
Ssu7g2551 708 Gene3D - 295 432 - -
Ssu7g2551 708 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 705 IPR045051 -
Ssu7g2551 708 Pfam Fibronectin type-III domain 603 703 IPR041469 -
Ssu7g2551 708 SUPERFAMILY Subtilisin-like 74 557 IPR036852 GO:0004252|GO:0006508
Ssu7g2551 708 Pfam Subtilase family 97 531 IPR000209 GO:0006508|GO:0008236
Ssu7g2551 708 Gene3D Peptidase S8/S53 domain 98 566 IPR036852 GO:0004252|GO:0006508
Ssu7g2551 708 CDD PA_subtilisin_like 301 426 - -
Ssu7g2551 708 ProSiteProfiles Serine proteases, subtilase domain profile. 79 553 - -
Ssu7g2551 708 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Ssu7g2551 708 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Ssu7g2551 708 Gene3D - 570 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2551 Ssu-Chr7 50205686 50212478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2551 1 527 Subtilisin-like Serine Gene Family AT5G03620 62.152 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2551 - - gmx:100816428 1230.31