Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2523 ATGAACGAGGTTCATCTTCATCCCATGATGAAGAATCACCATGCATTGTTCATGTTGTTTTCATGTTTCTTACCGTATCTTACGTTGAGTCTCCACCACAATGACACTCACGCGCTCACCCTCTTCCGTCGCCAAAGCGACCTACATGGCTACCTCCTCCAAAACTGGACAGGCGGCGACGCCTGCTCCTCCGCGTGGCGCGGCGTCCGGTGCTCCCCGAACGGCCGCGTTACCGCGCTCTCCCTCCCTTCCCTCAACCTCCGCGGCCCCGTCGACCCCCTCGCTCCACTCACCCACCTCCGCCTCCTGGACCTCCACGACAACCGCCTAAACGGCACCGTTTCGCCGCTCCTCTCCAACTGCACCAACCTCCGACTCCTCTACCTCGCCGGCAACGACTTCTCCGGCGAGATCCCGCCCGAGATATCGTCCCTCGAAGGCCTCCTCCGCCTCGACCTCTCCGACAACAACATCCGCGGCAAGGTCGACTTCATCTCCAACTTAACTCAACTCATCACACTGAGACTTCAGAACAACCTTCTCTCTGGCCAAATCCCCGACCTCTCTTCCTCCATGAAAAACCTCAGAGAACTCAACGTGACAAACAACGAGTTCTACGGTCGCTTACCACACACCATGCTGAAGAAATTCGGTGCTGCAAGCTTCTCCGGCAACGAGGGTTTGTGTGGTGCAACCCCGTTACCGGTTTGTTCCTTCACCACAAATCCtgatgataacaataataataataacaatgacgatgatgataataataataatgaaccAAGTCAAACAGTTCCTTCAAACCCTAGTTCTTTTCCCGAAACGAGCGTGATCGCTCGACCGGGGAAAGAACCTCGCAAGGGTTTGAGTCCCGGAGCCATTGTGGCCATTGTTGTGGCGAACTGCGTGGCGTTGTTGGTGGTGACGTCATTCGTCGTTGCTCACTGTTGTGCAAGGGGGAGAGGGTCTAGTTTGGTGGGGAGTGGGGAGAGTTACGGGAAGAGGAAGAGTGGGAGCAGTTATGGTGGGAGTGAGAAGAAGGTGTATGCTAGCGGGGGTGGTGAGAGTGATGGAACTACTGGGACGGATAGGAGCAGGCTTGTGTTTTTTGATAGGAGGAGTGAGTTTGAGTTGGAGGATCTGCTGCGTGCGTCTGCGGAGATGCTTGGGAAGGGTAGTTTGGGGACGGTTTATAGGGCGGTGCTTGATGATGGGTGCACCGTCGCGGTCAAGAGGCTCAAGGATGCGAACCCTTGCGCGAGGCATGAGTTTGAGCAGTACATGGATGTGATTGGGAAGCTTAAGCACCCCAATATTGTGAGACTCAAAGCATACTACTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCCAACGGAAGCTTGCACGCTCTTCTCCATGGGAACCGTGGTCCCGGAAGAATCCCATTGGATTGGACTACAAGAATAAGCTTGGTGTTAGGGGCAGCAAGAGGTCTTGCTAAGATTCACGGAGAGTACAGTGCCGCTAAAGTGCCTCACGGGAACGTAAAATCTTCCAACGTGCTTCTAGACAAGAACGGCGTTGCATGCATCTCTGACTTCGGGCTGTCCCTTCTGTTGAACCCGGTTCACGCCATTGCACGACTGGGGGGGTACAGGGCCCCGGAACAGGAGCAACAGAAGAGGCTGTCCCAGCAGGCTGACGTGTACAGTTTCGGCGTGTTGCTGTTGGAAGTTCTCACAGGAAGAGCTCCTTCGTCGCAGTACCCTTCACCGGCTCGTCCCAGAATGGAGGAAGAGGAACAACAGGCCGTGGTGGACCTTCCCAAATGGGTTCGCTCGGTGGTGAAGGAAGAGTGGACCGCGGAGGTGTTTGACCAGGAACTGTTGCGCTACAAGAACATCGAGGAAGAGCTTGTGTCCATGCTGCACGTTGGCTTGGCTTGCGTGGTGCCGCAGCCTGAGAAGAGGCCAACCATGGACGAAGTTGTGAAGATGATTGAGGATATCAGGGTGGAGCAATCGCCTCTTGGGGAGGACTATGATGAATCGCGCAATTCGCTTTCACCTTCCATTCCCACCACTGAAGATGGTCTAGCTTAG 2094 0.5344 MNEVHLHPMMKNHHALFMLFSCFLPYLTLSLHHNDTHALTLFRRQSDLHGYLLQNWTGGDACSSAWRGVRCSPNGRVTALSLPSLNLRGPVDPLAPLTHLRLLDLHDNRLNGTVSPLLSNCTNLRLLYLAGNDFSGEIPPEISSLEGLLRLDLSDNNIRGKVDFISNLTQLITLRLQNNLLSGQIPDLSSSMKNLRELNVTNNEFYGRLPHTMLKKFGAASFSGNEGLCGATPLPVCSFTTNPDDNNNNNNNDDDDNNNNEPSQTVPSNPSSFPETSVIARPGKEPRKGLSPGAIVAIVVANCVALLVVTSFVVAHCCARGRGSSLVGSGESYGKRKSGSSYGGSEKKVYASGGGESDGTTGTDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNIVRLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHGEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEQQKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPARPRMEEEEQQAVVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVPQPEKRPTMDEVVKMIEDIRVEQSPLGEDYDESRNSLSPSIPTTEDGLA 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2523 697 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 688 - -
Ssu7g2523 697 ProSiteProfiles Protein kinase domain profile. 384 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2523 697 MobiDBLite consensus disorder prediction 240 287 - -
Ssu7g2523 697 MobiDBLite consensus disorder prediction 672 697 - -
Ssu7g2523 697 SUPERFAMILY L domain-like 32 213 - -
Ssu7g2523 697 Gene3D Ribonuclease Inhibitor 32 225 IPR032675 -
Ssu7g2523 697 Gene3D Transferase(Phosphotransferase) domain 1 460 685 - -
Ssu7g2523 697 Gene3D Phosphorylase Kinase; domain 1 360 459 - -
Ssu7g2523 697 CDD STKc_IRAK 390 667 - -
Ssu7g2523 697 PANTHER LRR RECEPTOR-LIKE KINASE 19 688 - -
Ssu7g2523 697 MobiDBLite consensus disorder prediction 240 276 - -
Ssu7g2523 697 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Ssu7g2523 697 MobiDBLite consensus disorder prediction 325 361 - -
Ssu7g2523 697 Pfam Protein kinase domain 388 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2523 697 SUPERFAMILY Protein kinase-like (PK-like) 388 664 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2523 Ssu-Chr7 49393637 49396743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2523 28 693 Receptor kinase-like Gene Family AT2G36570 67.552 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ssu7g2523 Pkinase 6.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2523 - - gmx:102660494 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2523 7 49393637 49396743 Ssu7g2523 7 49393637 49396743 ECH
Ssu4g0920 4 14654985 14657116 Ssu7g2523 7 49393637 49396743 PCT