Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2522 ATGGCCTCTtgcgacgacgacgacgacttCTCCCTCCTCCGCGACGACAACCACCACCTCCACCAACCCTACGCGCCGCACCACCACTTCTCCCCCGTCGCCGCCGTCCCCGTCCCGCCCAAACCCGTCGCCGACGACGCCGACGACTACGCAAACCCCTTCGACGACGACAGCGAGAAGCGCAAGGAGCGCGACGAGATCGGCGAGGGAGCCACCTCGTACGGATTCAACAAGAGATCCAAGACACAGTCGAGCACCGCCGTCTCCTGCGGCGCCGCCGAGTACCGGAAGGACAGGGAGGAGTGGAGCGACATGGCGATCGTGTGCCTCCTCGAGGCGTACACGGAGAAGTTCACGCAGCTGAATCGGGGAAACCTGAGGGGAAGAGACTGGGAAGAGGTTGCGGCGGTGGTGAGCGAGCGTTGCGAGAACCAATCGAAGAGCGTGGAGCAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACATAGAATGAGCAGTGGCTGCATTTCCTCCAGCCACTGGCCTTGGTTCAAGCAATTGGAACAGATCGTCGGAAATTCTGTTCCGGCGAAGTTCTCCGACGAGGATAAGGCGGTTGTTTCCGCCGGAACTTCGCCCAGGCAATCGAAGAGATATGGAGTGTCGACGCCCAGCACTGGAGGTCAAGCAAATAGCATGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGGAGGGTAGTCCTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTCTCAACAGAAGTTGCCATAGCTTCCCGCCTTGGAGTAGAGGTGGCGATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGATGCATGGGTAACTGCTACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTGATGAATTCAATATTGCTTCAATCGACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATCGGTTTTGGTTCTGGCAACCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGTAGTTCTGAAGGGTACTAACGTAGATGGTGTATATGACTGCAACTCGCGAGATAACAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTGGGGTCAAGAGGCATCACCTCTATGGATATGTCTGCACTGACATTCTGCGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGCACACTAATTGATCAAACTGGAGCAATAAGCTAA 1446 0.5097 MASCDDDDDFSLLRDDNHHLHQPYAPHHHFSPVAAVPVPPKPVADDADDYANPFDDDSEKRKERDEIGEGATSYGFNKRSKTQSSTAVSCGAAEYRKDREEWSDMAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISSSHWPWFKQLEQIVGNSVPAKFSDEDKAVVSAGTSPRQSKRYGVSTPSTGGQANSMKSKALSNLRWRRVVLKISGAALTGSDTCNIDPKVAMLVSTEVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGSGNPLFSTDIAAALRASELNAEVVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGITSMDMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2522 481 Gene3D - 232 480 IPR036393 -
Ssu7g2522 481 MobiDBLite consensus disorder prediction 54 69 - -
Ssu7g2522 481 Gene3D - 102 165 - -
Ssu7g2522 481 Pfam Amino acid kinase family 244 454 IPR001048 -
Ssu7g2522 481 SUPERFAMILY Carbamate kinase-like 241 474 IPR036393 -
Ssu7g2522 481 Coils Coil 142 169 - -
Ssu7g2522 481 Pfam Myb/SANT-like DNA-binding domain 99 189 IPR044822 -
Ssu7g2522 481 CDD AAK_UMPK-PyrH-Ec 243 475 IPR015963 GO:0005737|GO:0006221|GO:0033862
Ssu7g2522 481 PANTHER URIDYLATE KINASE 49 481 - -
Ssu7g2522 481 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 49 481 IPR011817 GO:0006221|GO:0009041
Ssu7g2522 481 MobiDBLite consensus disorder prediction 21 78 - -
Ssu7g2522 481 MobiDBLite consensus disorder prediction 209 233 - -
Ssu7g2522 481 Hamap Uridylate kinase [pyrH]. 240 475 IPR015963 GO:0005737|GO:0006221|GO:0033862
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2522 Ssu-Chr7 49387095 49391973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2522 102 194 Trihelix Transcription Factor Family AT3G14180 37.895 2.66e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ssu7g2522 AA_kinase 5.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2522 - - gmx:100805176 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2522 7 49387095 49391973 Ssu7g2522 7 49387095 49391973 ECH