Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2508 ATGGAACTCTCTGTGTTCCACCATCAGCACCATCCTATGATTCTCCATTGCCCCCTTACCTTGACAAGGACACACAAAAGACTTAACAACAAAAGCTCATATAGGTTACCATGCCACTGCTCACATTCTTCCACAAATAAAACTGCTGCAGAACCAGCTACGCTGTCTTTAAGTATTGAAGGAAGGAGAGCATTGCTCAGTTGTCTCCTCACAACCGTTGCTGGAGTCTATGCATGTGATGTGGCTGAAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCCAAAATTCCTGAAAGTGATTATACAACCTTGCCCAATGGTCTGAAGTACTATGATTTGAAGGTTGGGAGTGGAGCTGAGGCTAAAAAGGGATCCCGTGTTGCAATTCACTATGTCGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCCAATCTGAGAGGGGAACAGTCCTTAAAGGGTTGGATTTAGGAGTACAGGGCATGCGAGTAGGAGGCCAGCGACTGTTAATTGTTCCACCTGAACTTGCCTATGGAAGCAAGGGAGTCCAAGAAATCCCTCCCAATTCAACAATAGAGGTGAATTATTCTGATCTCTTTGTTAAGATTTGTTCCTGCAAGATGATACTACAATTAACATTTTAG 696 0.444 MELSVFHHQHHPMILHCPLTLTRTHKRLNNKSSYRLPCHCSHSSTNKTAAEPATLSLSIEGRRALLSCLLTTVAGVYACDVAEAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGSGAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIEVNYSDLFVKICSCKMILQLTF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2508 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 8 214 - -
Ssu7g2508 231 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 8 214 - -
Ssu7g2508 231 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 121 210 IPR001179 GO:0003755
Ssu7g2508 231 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 125 219 IPR001179 GO:0003755
Ssu7g2508 231 Gene3D - 81 219 IPR046357 GO:0003755
Ssu7g2508 231 SUPERFAMILY FKBP-like 93 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2508 Ssu-Chr7 49115083 49119002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2508 125 212 Calmodulin-binding Proteins AT5G48570 40.000 1.64e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2508 - - gmx:100305843 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2508 7 49115083 49119002 Ssu7g2508 7 49115083 49119002 ECH