Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2494 ATGCCTTGCTCACTCTCCCTCACACCCCTCTCTCTCTTCCCTCCCCGCAAAGCCACTCCTTTTCCAAAATCTCATCCATTTCCCCGCCTCTCCGTGAAATCCTCAATCAACAAAAACCCCGACACCAGCACCAAGCCCAGCTCCTGGGTCAGCCCGGACTGGCTCACCTCCCTCTCCCGCTCCCTCGCCGCCGGGAAAGACGACTCCGGCATCCCCGTCGCGAGCGCCAAGCTCGATGACGTGTCCGACCTCCTCGGCGGCGCTCTCTTCCTCCCTCTCTTCAAGTGGATGCAGGACTACGGCCCCATTTACCGCCTCGCCGCTGGCCCCAGAAACTTCGTCGTCGTTAGCGACCCCGCCATTGCGAAGCACGTGCTCAGGAACTACGGGAAATACGGCAAGGGTCTCGTTGCTGAGGTCTCGGAGTTCTTGTTCGGGTCCGGTTTCGCCATCGCCGAAGGTCCACTCTGGACGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCATAAACGGTACTTGTCTGTTATAGTGGATAGGGTATTTTGTACATGTGCTGAGAGATTAGTGGAGAAGCTACAACCTGATGCACTCAATGGAACTGCTGTTAACATGGAGGAGAAGTTTTCACAGTTGACTCTTGATGTTATTGGTTTATCTGTATTTAACTATAACTTTGACTCGCTCAATGCAGACAGTCCTGTTATCGAGGCTGTTTATGCTGCATTGAAAGAGGCAGAGGCTCGATCAACTGATCTTTTACCGTATTGGAAGTTTAAATTTCTTTGTAAGATAATTCCAAGACAAATAAAGGCTGAAGAGGCTGTTAGCGTTATCAGGAAAACTGTTGAGGatcttattgaaaaatgtaGAGAGATTGTAGAATCTGAGGGTGAAAAAATTGATGTTGAAGAATATGTGAATGACACTGATCCTAGTATCCTCCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCCAGTGTGCAATTAAGGGATGATCTTTTGTCACTATTAGTTGCTGGTCATGAGACCACTGGCTCAGTGCTGACCTGGACACTTTATCTTCTAAGCAAGGATTCTTCCTCGTTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGTCCTGGCTTTGAAGATATTAAAGACCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTCCGGCTCTATCCACATCCTCCGGTATTGATAAGAAGAGCTCAAGTTCCTGATGAGCTTCCGGGTGCTTACAAAGTCAATACTGGTCAAGATATTATGATTTCTGTATACAACATACATCATTCTTCTGAGGTTTGGGATAGGGCTGAAGAGTTTATGCCCGAAAGATTTGATTTGGATGGTCCAGTGCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGTGGAGGGCCTCGCAAGTGTGTTGGTGATCAGTTTGCTTTGTTGGAAGCTATAGTTGCTCTTGCAATCTTTCTACAGCACATGAACTTCGACCTGGTTCCTGATCAGAATATCAGTATGACTACAGGAGCAACAATACACACAGCAAATGGCTTGTACATGAAACTGAGCAGACGGTTGAAATAG 1602 0.4719 MPCSLSLTPLSLFPPRKATPFPKSHPFPRLSVKSSINKNPDTSTKPSSWVSPDWLTSLSRSLAAGKDDSGIPVASAKLDDVSDLLGGALFLPLFKWMQDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYGKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSVIVDRVFCTCAERLVEKLQPDALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSLNADSPVIEAVYAALKEAEARSTDLLPYWKFKFLCKIIPRQIKAEEAVSVIRKTVEDLIEKCREIVESEGEKIDVEEYVNDTDPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPGFEDIKDLKFLTRCIIESLRLYPHPPVLIRRAQVPDELPGAYKVNTGQDIMISVYNIHHSSEVWDRAEEFMPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFDLVPDQNISMTTGATIHTANGLYMKLSRRLK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2494 533 Pfam Cytochrome P450 93 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 Gene3D Cytochrome P450 72 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 MobiDBLite consensus disorder prediction 19 50 - -
Ssu7g2494 533 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 109 531 - -
Ssu7g2494 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Ssu7g2494 533 SUPERFAMILY Cytochrome P450 85 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2494 533 PANTHER CYTOCHROME P450 FAMILY 4 109 531 - -
Ssu7g2494 533 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2494 Ssu-Chr7 48889995 48898161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2494 14 531 Cytochrome P450 AT3G53130 80.347 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2494 K09837 - gmx:100803324 962.985