Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2485 ATGGAAGTTAAAATACTGTCCACACAGTGCATCAAACCTTCTAGCCCAACACTAACACACCCAGAAACACATAAGCTCTCAATCTTAGACCAGTTCATGCcttctatatatataccaaTGGTGCTTTTCTACTCTGCTGATCAGAACCCTCAAGCCATTAATGATAGTGGTATCATTGAGCAAAGATTGAAACAACTAAAGGAATCCTTATCACAAGTCTTGAATCACTTTTACCCATTTGCTGGGAGGATTAAAGACAAGCTTATCATCGATTGCAACGATGATGGGGTTCACTACACTGAGGCCAAAGTAAGTTGTAGTTTAGTTGAATTTTTCAACCGATctaatttcttgtcatttatccATAAACTTCTTCCAAATCAACCTGTTTGGGAAGTAGCAACTGAAGGGTACACAACTATGATACAAGTGACTTGTTTTGCATGCGGTGGCATGGTGATAGGTACCTTGATATCTCATATGATAGTGGATGGAGCAGGTGCGACTTTCTTTTTAAACAGTTGGGGTTCTAACTCTCGTAGTGAATTTCAACATGCATTTGAATTTCCTAACTTTGATACCCCATTCCCTCGGAATAATGCATGCCCACAAGATACAAATGTGATGACTTTCTGTGGCCAATTTTTGAACAAGGGTAGGCTTGCTTCGAGGAGATTTTTGTTTGATGCAGAAGCTATTTTGAGGTTAAGGGCTCAAGGGTCTAGTTTAACCGTGCAAAATCCTACTCGAGTGGAGGTAGTAACATCCCTTCTATGCAAATGTACTGCAAAAGTTTTCAAGGCAAACTCTGGTTTAGAGAGGCCCACTTTGATAACTAATGCAGTAAATATGCGTCGAAGGGCATCTCCTAATTTTCCAAAATCGTGTATGGGTAATTTTGCTTGGTTGGCTACGGCTTTAATGAGTGCAAATGAGTTACCTGACGTGGTTATTAAATTGAGGGAAGCAGTGACAACTATCAATTCTGACTTTGTGAAAAGGTTCCAAGGTGAAGGAGGGTTTGTTCAATATAGTGAAATTTCAAAACAGTTAATTGAGACAGCGTCGAGTGTTGCACTGACAAGTGGGGTTAATTATGTTCATTGTACGAGTtggtgtaattttggtctttacgACATTGATTATGGATGGGGAAAGCCAATTTGGGTGTCTGGCGCTGCTAATTTACCTGACGGCGATACTATGTTTTTAAACTCGGTCATCCTAATGGATACACCGTCAGGAAATGGAATGGAAGTTTGGgtttttttaaatgaagatGATATGGTCAAATTGCAACAAGACAAGGAGCTTCTTGCATTTGCAACCTTAGATCCAAATCCTCTACAACTAACGAATTATACATCTCATGCCTGA 1377 0.3805 MEVKILSTQCIKPSSPTLTHPETHKLSILDQFMPSIYIPMVLFYSADQNPQAINDSGIIEQRLKQLKESLSQVLNHFYPFAGRIKDKLIIDCNDDGVHYTEAKVSCSLVEFFNRSNFLSFIHKLLPNQPVWEVATEGYTTMIQVTCFACGGMVIGTLISHMIVDGAGATFFLNSWGSNSRSEFQHAFEFPNFDTPFPRNNACPQDTNVMTFCGQFLNKGRLASRRFLFDAEAILRLRAQGSSLTVQNPTRVEVVTSLLCKCTAKVFKANSGLERPTLITNAVNMRRRASPNFPKSCMGNFAWLATALMSANELPDVVIKLREAVTTINSDFVKRFQGEGGFVQYSEISKQLIETASSVALTSGVNYVHCTSWCNFGLYDIDYGWGKPIWVSGAANLPDGDTMFLNSVILMDTPSGNGMEVWVFLNEDDMVKLQQDKELLAFATLDPNPLQLTNYTSHA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2485 458 Gene3D - 1 208 IPR023213 -
Ssu7g2485 458 PANTHER VINORINE SYNTHASE-LIKE 3 450 - -
Ssu7g2485 458 Gene3D - 220 441 IPR023213 -
Ssu7g2485 458 PANTHER F21J9.9 3 450 - -
Ssu7g2485 458 Pfam Transferase family 1 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2485 Ssu-Chr7 48720829 48722205 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2485 1 397 Monolignol Biosynthesis Gene Families AT5G48930 24.368 2.08e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2485 - - gmx:100792475 706.442