Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2482 ATGGTGCTTTTCTACTCTGCTGATCAGAGCCCTCAAACCATTAGTGATAGTAGTATCACTCAGCAAAGATTCAAGCAATTAAAGGAATCCTTGTCACAAGTTTTGACTCACTTTTACCCATTTGCTGGAAGGGTTAAAGACAAGCTTACCATCGATTGCAATGATGAAGGGGTTTTCTACACTGAGGCCAAAGTAAGTTATACTTTAGCTGAATTTTTCAACCAAtctattttttcatcatttatcCACAAACTTCTTCCAAATCAACCTATTATGGAAGTAGCAACTGAAGGGTACACAACTATGGCACAAGTGACTTGTTTTGCATGCGGTGGCATGGTGATAGGTACCTTGATATCTCATATGATAGCAGATGGAGCAGCCGCgagtttctttttaaattgttgGGGTTCTAACTCTCGTAGTGAATTTCAAAATGCACTGGCATTTCCTAACTTTGATACCCCTTTCCCTCGGAATATTGCATGCCGACAAGACACAAATGTGATGGCATTGTGTGGCCAATTTTTGAACGAGGGTAGGCTTGCTACAAGGAGATTTTTGTTTGATGCAAAAGCTATTTCGAGGTTAAGAACTCAAGGATCTAGTTTAACCGTGCAAAATCCTACTCGAGTGGAGGTAGTAACATCCCTTCTATGCAAATGTACTGCAAAAGCTTTCAAGGCAAACTCTGGTTTAGAGAGGCCCATTTTGATAACTCATGCAGTAAATATGCGTCGAAGGGCATCTCCTAATTTTCCAAAATCGTGTATGGGTAATTTTGCTTGGTTGGCTACGGCTTTAATGAGTGCAAAGGAGGAGGTAATTAAGTTACCTGACTTTGTTATTAAATTGAGGGAAGCAGTGACAACTATCAACTCTGAATTTGTGAAAAGCTTCGAAGGTGAAGGAGGGTTTGCTAAATATTGTGAAATCTCAAAACAGTTAATCGAGACAGCTTCAAATGTTGCACTGACAAGTGGGGTTAATTATGTTCATTATACGAGTtggtgcaattttggtctttatgaCGTTGATTACGGATGGGGAAGGCCAATTTGGGTATCTTGTGTCGCTAGTTCACTTGACGATAGTATGTTTTTTAACTCGGTCATCCTAATGGATACACCATCAGGAAATGGAATTGAAGTTtggatttatttaaatgaagatGAAATGGCCACATTGCAACAAGACAAGGAGCTCCTTAAGTTTGCAAACTTCGATCCAAATCCTCTACAACTAAAGGATTATATATCTCATGCCTGA 1269 0.3759 MVLFYSADQSPQTISDSSITQQRFKQLKESLSQVLTHFYPFAGRVKDKLTIDCNDEGVFYTEAKVSYTLAEFFNQSIFSSFIHKLLPNQPIMEVATEGYTTMAQVTCFACGGMVIGTLISHMIADGAAASFFLNCWGSNSRSEFQNALAFPNFDTPFPRNIACRQDTNVMALCGQFLNEGRLATRRFLFDAKAISRLRTQGSSLTVQNPTRVEVVTSLLCKCTAKAFKANSGLERPILITHAVNMRRRASPNFPKSCMGNFAWLATALMSAKEEVIKLPDFVIKLREAVTTINSEFVKSFEGEGGFAKYCEISKQLIETASNVALTSGVNYVHYTSWCNFGLYDVDYGWGRPIWVSCVASSLDDSMFFNSVILMDTPSGNGIEVWIYLNEDEMATLQQDKELLKFANFDPNPLQLKDYISHA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2482 422 Gene3D - 1 167 IPR023213 -
Ssu7g2482 422 PANTHER F21J9.9 1 414 - -
Ssu7g2482 422 PANTHER VINORINE SYNTHASE-LIKE 1 414 - -
Ssu7g2482 422 Pfam Transferase family 20 402 - -
Ssu7g2482 422 Gene3D - 181 406 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2482 Ssu-Chr7 48669658 48670926 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2482 27 398 Monolignol Biosynthesis Gene Families AT5G48930 24.146 5.10e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2482 - - gmx:100792475 673.315