Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2464 ATGGTGGTGGCACAGCTAACAAAAACCAAGGCCTTCATACACCACGTTATCACTGGCCGTTGGTTCATGATCTTTGCCTCATGTCTCATCATGGCGGTTTCAGGAGCAACATACATGTTCGGTTTATACTCTAACGAGGTCAAAACCTCTTTGGGGTATGACCAGTCAACGCTTAACTTGATAAGCTTCTTCAAAGACCTTGGTGCCAACCTTGGAATTTTCTCAGGGTTGATCAATGAGATAAGCCCCCCTTGGGTGATACTAGCCATGGGAGCCACTATGAACTTCGTTGGCTACTTCATGATATGGCTTTCTGTCACATCACGCATTGCCAAACCCCAAGTGTGGCAAATGTGTCTCTACTTTTACATTGGTTCTAATTCTCAGTCTTTTGCCAACACTGGTGCGCTGGTCAATTGTGTCAAGAGCTTCCCAAGAAGCCGTGGAAGTGTTATTGGTCTTCTCAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGCTATACCATGCCTTCTATGGTGACAACTCAAAAGCTCTTATATTCCTCATTGGTTGGCTTCCTGCTGCTATTTCCTTCATTTTCCTTCCAACAGTTAGGGTGTTGAGTATAACCCCACAACCGAAAGAGGTCAAGGTTTTTTACCAACTTCTTTATATTTCACTTGGGGTTGCGGGGTTTCTCATGGTTTTGATTGTCATACAGAACAAGTTGAGTTTCTCAAGGGTAGTGTACATAGTGGATGGCATGGTGgttctcttcttgcttcttctcCCACTTGCTGTTGTGTTTAAAGAAGAATTCAAACTTTGgaagaaccaaaaccaaaaccaaacctTCACTGACCGTGTAGATGGTGCTTCAGTTATTGAATTGCCACAGCCAGAAGAAGCACATGCAGCACCATCTCAtttggaaaggaaaaataatccATGTTTGAGGAACGTTTTCAAACCTCCAAAAAGGGGTGAGGACTACACCATCTTCCAAGCTCTTTTCAGCATTGACATGCTAATTCTGTTCATTGCAACAGTGTTTGGTGTTGGTGGAACATTAACAGCACTTGACAATTTGGGACAGATTGGAACTCATTGGGGTACCCCAAAAAGAGCCTCACAACTTTTGTGTCCCTTGTGA 1140 0.4132 MVVAQLTKTKAFIHHVITGRWFMIFASCLIMAVSGATYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVILAMGATMNFVGYFMIWLSVTSRIAKPQVWQMCLYFYIGSNSQSFANTGALVNCVKSFPRSRGSVIGLLKGYVGLSGAIFTQLYHAFYGDNSKALIFLIGWLPAAISFIFLPTVRVLSITPQPKEVKVFYQLLYISLGVAGFLMVLIVIQNKLSFSRVVYIVDGMVVLFLLLLPLAVVFKEEFKLWKNQNQNQTFTDRVDGASVIELPQPEEAHAAPSHLERKNNPCLRNVFKPPKRGEDYTIFQALFSIDMLILFIATVFGVGGTLTALDNLGQIGTHWGTPKRASQLLCPL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2464 379 Pfam Nodulin-like 20 265 IPR010658 -
Ssu7g2464 379 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 373 - -
Ssu7g2464 379 PANTHER MFS TRANSPORTER 6 373 - -
Ssu7g2464 379 SUPERFAMILY MFS general substrate transporter 20 237 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2464 Ssu-Chr7 48081015 48082154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2464 10 372 Nodulin-like Gene Family AT2G39210 58.602 1.92e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2464 - - gmx:100814000 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2464 7 48081015 48082154 Ssu7g2464 7 48081015 48082154 ECH
Ssu4g0982 4 15664547 15665869 Ssu7g2464 7 48081015 48082154 PCT