Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2439 ATGCTTAGGTCCTTTGTTGGGAAAATAGAAAAGGGTGTTTCACTCTTTGCACACAGAAGGCCCCCACTGAGGTACTTCAGTGAGGTGCCAGATGATGTTAGGGAAGGATATTTTGCTGTTCTTGCAACCAAGGATGGAGAATCCAAAAGGTTCATTGTTGGGTTACATTACTTGACTGATCCTGCTTTCTTGGGACTGCTGGATCAGGCTCAGGAAGAGTTTGGCTTTAGACAACAGGGAGCTCTTGCTATCCCTTGTCAGCCTCAAGAATTACGGAAGATTCTAGATGGTCGGAAAGCCTAA 303 0.4554 MLRSFVGKIEKGVSLFAHRRPPLRYFSEVPDDVREGYFAVLATKDGESKRFIVGLHYLTDPAFLGLLDQAQEEFGFRQQGALAIPCQPQELRKILDGRKA 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2439 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 99 IPR003676 GO:0009733
Ssu7g2439 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 99 - -
Ssu7g2439 100 Pfam Auxin responsive protein 25 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2439 Ssu-Chr7 47536113 47536415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2439 28 95 Calmodulin-binding Proteins AT5G20810 44.118 3.63e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2439 - K14488 gmx:100775971 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2439 7 47536113 47536415 Ssu7g2439 7 47536113 47536415 ECH