Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2438 ATGCTTAGGTCTTTTGCTGGGAAGATAGAAAAGGGTGTTTCACTCTTAGTACAAAGAAGGCCCCCACTGAGGTACTTCAATGAAGCCAGAAGTGAGGTGGCAGATGATGTTAGGGAAGGATATTTTGCTGTGCTTGCAACCAAGGGTGGAGAATCCAAAAGGTTCATTGTTGGGTTACATTACTTGACTGATCCTGCTTTCTTGGGACTGCTGGATCAAGCTCAGCAAGAGTTTGGTTTCAGACAACAGGGAACTCTAGCTGTCCCTTGTCAGCCTCAAGAATTACAGAAGATTCTAGATGCATGGTCGAAGAGCATATAG 321 0.4486 MLRSFAGKIEKGVSLLVQRRPPLRYFNEARSEVADDVREGYFAVLATKGGESKRFIVGLHYLTDPAFLGLLDQAQQEFGFRQQGTLAVPCQPQELQKILDAWSKSI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2438 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 102 IPR003676 GO:0009733
Ssu7g2438 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 102 - -
Ssu7g2438 106 Pfam Auxin responsive protein 29 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2438 Ssu-Chr7 47529172 47529492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2438 37 99 Calmodulin-binding Proteins AT2G24400 42.857 1.94e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2438 - K14488 gmx:100775971 166.007