Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2437 ATGCTTAGGTCTTTAGTTGGGAGGATAGAAAAGGGTCTTTCCCTCTTTGTACACAGAAGGCCCCCACTGAGCTACTACAATGAAGCCACAAGTGTGGTGTCAGATGATGTTAGGGAAGGATATTTTGCTGTTCTTGCAACCAAGGGTGGAGAATCCAAAAGGTTCATTGTTGGGTTGCATTACTTGAATGATCCTGCTTTCTTGGGACTGCTGGATCAAGCTCAGCAAGAGTTTGGTTTCAGACAGAAGGGAGCTCTTGCAATCCCTTGTCAGCCTCAAGAGTTGCAGAAGATTCTAGATGCATGGTCGAAGAGCATAGAGCAGAGAAGCACCAAAGGTGCAGGAAATAATgtgattgaaaatttatatattgatgttCATAACTTCCTATATATGTGA 399 0.416 MLRSLVGRIEKGLSLFVHRRPPLSYYNEATSVVSDDVREGYFAVLATKGGESKRFIVGLHYLNDPAFLGLLDQAQQEFGFRQKGALAIPCQPQELQKILDAWSKSIEQRSTKGAGNNVIENLYIDVHNFLYM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2437 132 Pfam Auxin responsive protein 31 100 IPR003676 GO:0009733
Ssu7g2437 132 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 102 - -
Ssu7g2437 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2437 Ssu-Chr7 47510779 47511177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2437 36 116 Calmodulin-binding Proteins AT4G34750 38.272 1.13e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2437 - K14488 gmx:100775971 178.718