Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2435 ATGCTTAGGTCCTTTGTTGGGAAAATAGAAAAGGGTGTTTCACTCTTGGCACACAGAAGTGAGGTGCCAGATGATGTTAGGGAAGGATATTTTGCTGTTCTTGCAACTAAGGGTGGAGAATCCAAAAGGTTCATTGTTGGGTTACATTACTTGACTGACCCTGCTTTCTTAGGACTGCTGGATCAAGCTCAAGAAGAGTATGGTTTCAGGCAAAAGGGAGCTCTTGCAATCCCTTGTCAGCCCCAAGAATTACAGAAGATCCTAGATGGTCACAGAGTGTAG 282 0.4433 MLRSFVGKIEKGVSLLAHRSEVPDDVREGYFAVLATKGGESKRFIVGLHYLTDPAFLGLLDQAQEEYGFRQKGALAIPCQPQELQKILDGHRV 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2435 93 Pfam Auxin responsive protein 18 88 IPR003676 GO:0009733
Ssu7g2435 93 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 93 IPR003676 GO:0009733
Ssu7g2435 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2435 Ssu-Chr7 47499292 47499573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2435 21 88 Calmodulin-binding Proteins AT3G43120 44.118 5.40e-13 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2435 - K14488 gmx:100798016 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2435 7 47499292 47499573 Ssu7g2435 7 47499292 47499573 ECH