Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2434 ATGCTTATTAGGTCTTTTGTTGGGAAGATACAAAAGGGTCTCTCACTCAGCTACTTCAATGAAAGTCCACTGGAAAACACAAATGTTGTGCCAAATGATGTTAGGAAAGGATATTTTGCTGTTCTAGCAATCAAAGATGGAGAAACTAAAAGGTTTGTTGTTGAGTTAGACTATTTGAATAATCCTGTATTCTTGGGACTATTGGACCAGGCTCGCGAAGAGTATGGTTTCGGACAGCAGGGAACTGTAGCAGTCCCTTGTCGGCCTCAAGAATTACAGAAGATTATAGATGGTTGGAGAACGAGACCGGACAGCCTCAAAGGTGCGGCGGGAAGGGATATTTATTTTCCTAAGTTCCTATGA 363 0.4187 MLIRSFVGKIQKGLSLSYFNESPLENTNVVPNDVRKGYFAVLAIKDGETKRFVVELDYLNNPVFLGLLDQAREEYGFGQQGTVAVPCRPQELQKIIDGWRTRPDSLKGAAGRDIYFPKFL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2434 120 Pfam Auxin responsive protein 28 96 IPR003676 GO:0009733
Ssu7g2434 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 115 IPR003676 GO:0009733
Ssu7g2434 120 PANTHER SMALL AUXIN-UP RNA-RELATED 2 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2434 Ssu-Chr7 47490506 47490868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2434 3 96 Calmodulin-binding Proteins AT4G34750 35.789 3.01e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2434 - K14488 ccaj:109813579 197.978