Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2433 ATGATGCTTTGGTCTTTCTTTGGCAAGATACACGATGGTCTCTCAGTGATCTTTGCACCAAGGAGATCACCAACACCGATCAGCAACGAAGATTCAATGGATACAGCAACAAGGGTGCCAGATGACGTTTTGGAAGGACACTTTGTGGTTCTTGCTAACAAGGGGGAAAAAACCAAACGGTTTATTGTGGAGTTGCACTATTTGACTGACCCTGCATTTTTGGGACTGCTGGAGCGGGCAAAAGAAGAATATGGTTTCAATCAGAAGGGGGTTTTGGCAATTCCCTGCCACCCTCAAGAACTAGAGAAGATTCTAGAAGAACCGAGGGATGGCAGTGTGGGAGATGGAGGCAGCAAATTGACAGATTCAATTCAAGTTAATGAATGTAGCGCCATTTACTGCAGTTGA 408 0.451 MMLWSFFGKIHDGLSVIFAPRRSPTPISNEDSMDTATRVPDDVLEGHFVVLANKGEKTKRFIVELHYLTDPAFLGLLERAKEEYGFNQKGVLAIPCHPQELEKILEEPRDGSVGDGGSKLTDSIQVNECSAIYCS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2433 135 Pfam Auxin responsive protein 35 106 IPR003676 GO:0009733
Ssu7g2433 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 108 IPR003676 GO:0009733
Ssu7g2433 135 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2433 Ssu-Chr7 47456313 47456720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2433 28 115 Calmodulin-binding Proteins AT3G43120 32.609 1.01e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2433 - K14488 gmx:100809715 205.682