Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2428 ATGGGGGGCAAATGTCCGCACAGGAGCGTGAAGAAAAGAAGATATTCTCACAAGACAGCGCGCCGAACCAAATTCCTGATCAAAGGGGACGACATGGTTTATGAGCAGATAAACAAACCTGATGAAGAGAGAACCCCTTTACCCGTAGATGAAGATTTGCCTGGGATGGGCCAGTACTATTGCCTTCACTGCgaTCGATACTTTTCCAATATGGCTGTAAGGGATGAGCACTTTAAGACCAAACGACACAAGAAGCGGGTAAAACAAATGATGGGTCCTGCACCACATACTCAACTTGATGCCGAATTAGCCGCAGGGATGGGTATGCCAGACAATGGACCAAAGCTGATGTCCATGTAA 360 0.4694 MGGKCPHRSVKKRRYSHKTARRTKFLIKGDDMVYEQINKPDEERTPLPVDEDLPGMGQYYCLHCDRYFSNMAVRDEHFKTKRHKKRVKQMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2428 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Ssu7g2428 119 MobiDBLite consensus disorder prediction 1 20 - -
Ssu7g2428 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Ssu7g2428 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 110 IPR036236 -
Ssu7g2428 119 Gene3D Classic Zinc Finger 46 109 - -
Ssu7g2428 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Ssu7g2428 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2428 3 118 C2H2 Transcription Factor Family AT2G36930 75.000 1.01e-63 190