Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2402 ATGGCATCCAATAGGGGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAAGAGGCACAACGGATTGTGAATGCTGCAAAAAatgAAAAATTGGCTAGGTTGAAACAGGCCAAGGAAGAGGCTGATAAGGAGATTGCTGAATACCGAGCTCAACTAGAGTATGAGTTTCAAAAGAAAGTGTCAGAGAGTAGTGGGGATTCTGGAGCTAATGTCAAGCGGCTTGAGCAAGAGACTGAAGCAAAAATCCATCACCTGCAAACGGAGGCTGCAAGAATATCGGATGATGTTGTCGCCATGCTCCTCAAGTATGTTACAAGTGTGAAAAATTAG 333 0.4414 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEADKEIAEYRAQLEYEFQKKVSESSGDSGANVKRLEQETEAKIHHLQTEAARISDDVVAMLLKYVTSVKN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2402 110 Coils Coil 10 59 - -
Ssu7g2402 110 Gene3D - 1 110 - -
Ssu7g2402 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Ssu7g2402 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Ssu7g2402 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Ssu7g2402 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2402 Ssu-Chr7 46937582 46938417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2402 1 110 Primary Pumps ATPases(2) AT3G01390 74.545 1.70e-45 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2402 K02152 - gmx:100306550 194.512