Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2391 ATGAGCGTCATAGACATTCTAACCAGAGTCGATTCCATATGCAAGAAGTACGACAAATACGACGTCGAGAAGCACCGCGATTCCAATGTCTCCGGCGACGATGCCTTTGCCAGACTCTACGCCTCTGTGGACTCCGACATCGAGACCTTGCTTCAGAAAGCAGAAACTGCATCCAAGGAGAAAGGTAAGGCTTCTGCTGTAGCGATCAATGCGGAGATTCGTCGCACCAAGGCTCGGTTGCTGGAGGAGGTTCCCAAGTTGCAGAGATTGGCTGtgaaaaagGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCGGATAGAATTCAAGCTATCCCAGATGGGACTCCTGCTGCACCAAAACAAACTGGAGGCTGGGCAGCTTCTGCTTCACGTCCTGAAATTAAGTTTGATTCAGATGGGCGATTTGATGATGAATACTTCCAACAAACTGAGCAATCAAGTCAGTTTAGGCAGGAATATGAAATGCGTAGAATGAGACAGGATCAAGGTTTGGATATGATTGCTGAAGGATTGGATACATTGAAAGACATGGCACAAGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGATAAGGCATCTTCTGACCTTAAGAATACAAATGTTAGACTTAAAGACACAGTGAACCAGcTTCGATCCAGTCGAAACTTCTGTATCGATATTGTTTTGTTGattataattttgggaattgcTGCTTACTTATACAATGTACTAAAGAAATGA 798 0.4286 MSVIDILTRVDSICKKYDKYDVEKHRDSNVSGDDAFARLYASVDSDIETLLQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGTPAAPKQTGGWAASASRPEIKFDSDGRFDDEYFQQTEQSSQFRQEYEMRRMRQDQGLDMIAEGLDTLKDMAQDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2391 265 Gene3D - 170 231 - -
Ssu7g2391 265 CDD SNARE_Qc 175 230 - -
Ssu7g2391 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Ssu7g2391 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Ssu7g2391 265 Pfam SNARE domain 207 256 IPR000727 -
Ssu7g2391 265 SMART tSNARE_6 165 232 IPR000727 -
Ssu7g2391 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Ssu7g2391 265 PANTHER SYNTAXIN-73 1 261 - -
Ssu7g2391 265 PANTHER SYNTAXIN 1 261 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2391 Ssu-Chr7 46681736 46686489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2391 1 264 SNARE and Associated Proteins AT3G09740 78.195 2.09e-158 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2391 K08506 - gmx:100819272 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2391 7 46681736 46686489 Ssu7g2391 7 46681736 46686489 ECH