Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2389 ATGGCGATCACCACTACCAAGCCTCCTTCTAATATCTGTTTCCTCCTTCTGTTGCTTCTCCTACACTTTAATTTGGGCAAAAGCCAACTTCAGCTGAATTACTATTCTAAAAGCTGCCCAAAAGCGGAAGACATCATCAAGCAACAAGTCACGCAACTATATAACAAACATGGAAACACTGCCGTTTCGTGGGTCAGAAATCTCTTCCATGATTGCATGGTTAAGTCATGCGACGCATCACTACTGTTAGACACGGTGCGCAATGGTGTAGTGTCGGAGCAGACGTCAGGGAGAAGTTTTGGGATGAGAAACTTCAAGTACGTAAACACCATCAAGGCGGCGGTTGAAGAAGAATGCCCCTTGACAGTGTCATGCGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGCCTTGTTGGGAGGACCAAGCATTGAAATGAAGACAGGGCGAAAGGATAGCAAAGAAAGCTATGCAACGGAGGTGGAAGACTTCATTCCAAACCACAATGATTCCATATCCTTAGTGCTGTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGAGCTCACTCAGTTGGAAGAGTTCACTGCTTGAATCTGGTGCAGAGATTATACCCCACTGTGGACGAGACACTGGACCCTGCACACGCTGTGTACCTGAAACGTCGGTGCCCAACACCCAATCCCGATCCAAAGGCTGTCCAGTATTCGAGGAACGACCTGAAAACGCCCATGATCATTGACAACAACTACTACAAAAACATCTTACAACACAAGGGCCTTCTCACTGTGGATGAAGAGCTAGCAACTGACCCAAGAACGACACCTTATGTCCAAAAGATGGCCAACGACAATGAATATTTCCACCAACAGTTCTCAAGGGCCATTCTCCTGTTATCGGAGACCAATCCTCTAACCAGTGATCAAGGAGAAATAAGAAAGGATTGTCGCTACCTCAATGCCAATTAG 990 0.4636 MAITTTKPPSNICFLLLLLLLHFNLGKSQLQLNYYSKSCPKAEDIIKQQVTQLYNKHGNTAVSWVRNLFHDCMVKSCDASLLLDTVRNGVVSEQTSGRSFGMRNFKYVNTIKAAVEEECPLTVSCADIVALSARDGIALLGGPSIEMKTGRKDSKESYATEVEDFIPNHNDSISLVLSRFQAIGIDVEATVALLGAHSVGRVHCLNLVQRLYPTVDETLDPAHAVYLKRRCPTPNPDPKAVQYSRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTTPYVQKMANDNEYFHQQFSRAILLLSETNPLTSDQGEIRKDCRYLNAN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2389 329 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Ssu7g2389 329 Gene3D - 33 327 - -
Ssu7g2389 329 SUPERFAMILY Heme-dependent peroxidases 29 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 Pfam Peroxidase 47 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 ProSiteProfiles Plant heme peroxidase family profile. 29 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 Gene3D Peroxidase, domain 2 167 306 - -
Ssu7g2389 329 PANTHER PEROXIDASE 21 15 326 - -
Ssu7g2389 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g2389 329 PANTHER PEROXIDASE 25-RELATED 15 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2389 Ssu-Chr7 46652064 46654662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2389 32 327 Peroxidase AT2G37130 75.084 3.95e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2389 K00430 - gmx:100785485 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2389 7 46652064 46654662 Ssu7g2389 7 46652064 46654662 ECH