Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2345 ATGGCAACTCTTGGCGTGCAAGCAGTTCGTCCTCCCCCGTTAACTTCCACCTCCGACCAACCTCCTCTTTTTGATGGCACCACCAGgTTGTACATCGATTATGCTTGCCCCTATGCACAACGTGTATGGATCGCGAGGAACTACAAGGGCCTGCAAGACAagatcaaattggtccctatCAACCTTCAAAACAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGgtgCCATCGTTGGAGCACAGTGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCCAACTTTGAAGGGACACCTTTGTTTCCCGGTGATCCTGCCAAGAAAGAGTTCGGTGAGCAATTGATATCCTATAGTGATACATTCAACAAAGACCTGTTCTCTTCATTGAAAGGGGATGCTGTACAGCAAGCCAGTCCTGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCGTTCTTGCTTGGTCAATTCAGTTTGGTGGATGCTGCCTATATTCCATTTGTTGAAAGATTCCAAATTGTCTTTGCTGAGGTGTTCAAGCACGACATCACAGAAGGAAGGCCTAAACTTGCAACTTGGATTGAGGAGGTGAACAAGATAGATGCTTATACAGAGACAAGAATCGATCCTCAGGAAATCGTTGATAAATACAAGAAACGTTTTCTGCCTCAACAGTGA 714 0.4314 MATLGVQAVRPPPLTSTSDQPPLFDGTTRLYIDYACPYAQRVWIARNYKGLQDKIKLVPINLQNRPAWYKEKVYPENKVPSLEHSGKVLGESLDLIKYVDANFEGTPLFPGDPAKKEFGEQLISYSDTFNKDLFSSLKGDAVQQASPAFEYLENALGKFDDGPFLLGQFSLVDAAYIPFVERFQIVFAEVFKHDITEGRPKLATWIEEVNKIDAYTETRIDPQEIVDKYKKRFLPQQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2345 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Ssu7g2345 237 SUPERFAMILY Thioredoxin-like 20 108 IPR036249 -
Ssu7g2345 237 SFLD Main (cytGST) 29 210 - -
Ssu7g2345 237 CDD GST_C_Lambda 112 230 - -
Ssu7g2345 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Ssu7g2345 237 Gene3D Glutaredoxin 1 104 - -
Ssu7g2345 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Ssu7g2345 237 Gene3D - 105 236 - -
Ssu7g2345 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Ssu7g2345 237 MobiDBLite consensus disorder prediction 1 21 - -
Ssu7g2345 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Ssu7g2345 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Ssu7g2345 237 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2345 Ssu-Chr7 46054074 46063909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2345 10 234 Glutathione S-transferase Gene Family AT5G02790 67.111 4.31e-116 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2345 K00799 - gmx:547597 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1071 4 17053156 17054224 Ssu7g2345 7 46054074 46063909 PCT