Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2329 ATGAATCACTTGTCTACCTTAGCAGACTACAGCAACGTGCTTTCGGAAATTTTCTTGGACCTGCCTCCACCGCCGAAGTCGCCGTTGCCGGAATCTTACTTGTACAGTCCAGTATCCGACGACACTGCGGCGACGGCGTTCTCGGAGCAGATGGCGTGGCTGATTCTGGTCCTTCTTTGCAAGATCGACGGCAAATCGAGGCATTATAAGGAGGTTTCGTTGTCTTACCTGTTTCTCGCAAACAATCTCCGGCACGTGGTGGCCAAGGTCCGCACCTCGAACTTGCACTACGTACTCGGCGACGATTGGGTGCTAAGTCACGAGGCGAAGGTGAAGCGGTTGATGGCGAACTACGAGAGAGTAGCGTGGGACAAAGTGCTTTCGTCTTTGCCGTCAAATCCAACGGCGGAGGCGAGGGTGGTGTTCGGGAATTTCAATGTTGAATTCGAGAAAGCTTACCGGAGGGAGAACACGTTTATCGTGCCAGAACAGGAATTTCGGGAAGAAGTCAAGGCGTCTCTTGTCAAAAAAATAACCCCGATTTACCGCGAGGTGTATGAAACGCACCGCGTTGCGGTGGGATCGCTGAGGGAAATGAGGGAATATGTCACATTTACCCCCAAAGATGTTGAGAATTACATGTTGAATCTCTTCTTTGTGGGAAGAGCAAGCTCCGCTACTGGAggaaacaattcattttttgtaaggaaaaaatag 717 0.4895 MNHLSTLADYSNVLSEIFLDLPPPPKSPLPESYLYSPVSDDTAATAFSEQMAWLILVLLCKIDGKSRHYKEVSLSYLFLANNLRHVVAKVRTSNLHYVLGDDWVLSHEAKVKRLMANYERVAWDKVLSSLPSNPTAEARVVFGNFNVEFEKAYRRENTFIVPEQEFREEVKASLVKKITPIYREVYETHRVAVGSLREMREYVTFTPKDVENYMLNLFFVGRASSATGGNNSFFVRKK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2329 238 Gene3D Exocyst complex component Exo70 1 225 - -
Ssu7g2329 238 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 226 IPR004140 GO:0000145|GO:0006887
Ssu7g2329 238 Pfam Exo70 exocyst complex subunit 1 215 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu7g2329 238 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 226 - -
Ssu7g2329 238 SUPERFAMILY Cullin repeat-like 1 218 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2329 Ssu-Chr7 45774796 45775512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2329 1 218 EXO70 exocyst subunit family AT3G09520 46.256 1.24e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2329 K07195 - gmx:106795635 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2329 7 45774796 45775512 Ssu4g1096 4 17409405 17411315 PCT