Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2325 ATGGAGAAATCCCGCCGCAGCAAGTTCAACGCAGCACCCTCCAACCAACCCCAACCACCTCTTCCTCAAGGGAACAAACAGGTTCATAGACAGCGACAGGCTCCGAGTCCGTCTCCTGATTCTGGTTCATGCGGTGGTGGGGTCGCAGACAAGGATTCATCCTCATTTAAATTCGGGTGGAGATCCTCAAAACAGTTGTTTGGAACTCCGATTAAGAAGTTGTTAGCTGAAGAGATGTCACCAAAAGCTGAATCCAAAAGAAGATCCCCTGGTGTTATCGCCAGATTGATGGGTCTTGATGGGCTTCCATTCCAGCAGCCTTCTAATAAGCAGCATAAGGGTTTGTCTGAAAACCATCCGCAAAAGACAGCGCAATTAGAGAAAACATGCAGCCGAGGAGTGCCATATGATGGTCGATCATTTAGGAGAAGCTCAAAGGATCAGCAAGAATTTAAGGATGTGTTTGAGGTCTCGGAGATTCCGAAGGTAGAGAGCAGTAGGTATCCATCACAGGGGTGTCCAGACTTGAAGACCACTGATGCTGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTCATCAAGATTTGCAGTCTTCAAAGGATTTCCGTGACACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTGCAAGCTGCTCCTGTCCAATCACATTATGGTCGTGTAGAAGCTATGGATATTGAGAAGTATGAACATGACATCAATTGGAGGTCAGATAGGGAGAAAACACGTTTGAACTACGATAGATCTCATGAGAAGCATCATGATGGTTATCCCTGTCATTTTGACAAAAGACATGTGATGCACAGTTCACCGAAATCATCAAAGCTTCAATTTAAGGGTAGACATGAACAAGATGCAGTCCCCACAAAGATTGTCGTCCTCAAACCTAATCTTGGAAAAGTGCAGAATGGTACCAGAATTGTATCATCACCTTGTTCTTCACATAATTTTCCTTCAGGGCATGAAAATGACACTGAATTTTCAGGTGTCAAATTTAGAGACACTGAACTGTGTCAAGTGACAAATTTGCCTGAAAGTGCCAGGTCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAAAAATAGTCTTAACAATGGTTGCATGATGCTTCACACTTCTAGATTTAGAGGGTATGCTGGGGATGATAGTTCATGTAGTGTTTCTGGGAATGAATCTGCTGAGGAGTCTGAGGAAACAACTGGAACTTTGGGAAATTCATTTGACTTAAACAACCGTAGCAGGCGATCATCCCGTTCTAGTGAATCCTCTGTCAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAATATGGCACACAAGTCTCAAGAGGTGCAAGGCATCAGCAGGAGCAGCACGCTGGCTGAAATGCTTGCCATCCCTGACAAGCAATTGCGGACTGCAAATTTTGACGGCATGGCTAGTGGGGAATGCTCCCATGATAAATTTACTCCCAATAGTGAACCTGCTAAGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGATGCATTGGTAGTTTGTCGAGGTCAAAATCCCTTCCTTCTTCATCTACTGCCTTTGGAAGTCCTAGAACATTTTTGCGTACTGAAGCTCTTCGTCATGATCGATTTATGGTGCCAAAGGAAGCCCATAAACGGGAGAGGAGAAGAGCAGCAAAGAGTCTTGATCATAGACATGGTGTGAATAACAGAAGCACAAGATCTGGTCACAAGAAGTCTTGGTCTTTGCATTCTACAAAGCTAGAAGTTGATGAGTTTTCTCCAGACTTACGTACAATTCAGAATAAAATGAAGATCAATCTTGAAGATTCACCCAAACTTGAGGTTCTGGCAGGTGAATCTTTAACTGAGACCATAAGAGATACAGGTGCATTTACTGATGATGATGTGGACGTGACAACTGGAAGTACAGTTGGGTCTTCTGAACCTTCTAATGAGGTGCTTCCTGAAATATCTTCTCATGTTTCGATAAAAGGCGACAGTAGTGCAGTTGACAAAGACAATTCAATACAGCAGGATCTATCAGCTGGGTCTTCTGGTGGAAGTTCAGTCCTGGAATCTTCTTGCTGTAAAGATGCTGATCAACCCAGTCCTGTCTCAGTCCTAGAACCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAGCGCTGATCTACAAGGGCTGAGAATGCAACTGCAGTTGCTGAAGTTGGAATCTGAAGAGTATGTGGAGGGACCCATGGTACTTAGTGATGAAGATGGTGGGGAAGCAACTACTGTAATGTTAGAAGACAATGAATTTCGTAGAACTGAAGATAGCTGGGAGACATCCTACATTATTGATGTCTTGTCTGAATCTGGCATTGATGGAGCTCAACCTGATACAATTTCGGAAGTTTGGCATTCCCTAGAATGCCCTGTGAGTCTTTCGGTGTTTGATGAGCTTGAAAAGAGATATAGTGACTGGACTACTTGTTCAAGGTCTCAAAGGAGATTGCTTTTTGACcgtttaaatttagaaattgtcAAGATCAATGAGCAATCCACTTGTGCACTACCATGGGTGGGTCCAGCAACCACAAATGTTACTGGTTCTAATTTGATTAAGAACGGGTTCCGAGATGGACTTTGCAGGATACTAGAGAGCCAAGGAAAAGTAAGGGATGACGCTCTGGGGAAGGTGCTGGTTAGGGAATCGGAGTGGTTGGACTTGAGAGGTGACATTGATGTAATAGGCAGGGAAGTTGAGAGATTGTTATTAGATGATTTAGTGGCAGAGATAGTCGTCGGTACCTTGAAATTTCGTACCTGA 2943 0.4319 MEKSRRSKFNAAPSNQPQPPLPQGNKQVHRQRQAPSPSPDSGSCGGGVADKDSSSFKFGWRSSKQLFGTPIKKLLAEEMSPKAESKRRSPGVIARLMGLDGLPFQQPSNKQHKGLSENHPQKTAQLEKTCSRGVPYDGRSFRRSSKDQQEFKDVFEVSEIPKVESSRYPSQGCPDLKTTDAEMSFIEQKFMDAKRLATHQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQAAPVQSHYGRVEAMDIEKYEHDINWRSDREKTRLNYDRSHEKHHDGYPCHFDKRHVMHSSPKSSKLQFKGRHEQDAVPTKIVVLKPNLGKVQNGTRIVSSPCSSHNFPSGHENDTEFSGVKFRDTELCQVTNLPESARSWRQDSFESREIAKEITRQMKNSLNNGCMMLHTSRFRGYAGDDSSCSVSGNESAEESEETTGTLGNSFDLNNRSRRSSRSSESSVSREAKKRLSERWNMAHKSQEVQGISRSSTLAEMLAIPDKQLRTANFDGMASGECSHDKFTPNSEPAKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSTAFGSPRTFLRTEALRHDRFMVPKEAHKRERRRAAKSLDHRHGVNNRSTRSGHKKSWSLHSTKLEVDEFSPDLRTIQNKMKINLEDSPKLEVLAGESLTETIRDTGAFTDDDVDVTTGSTVGSSEPSNEVLPEISSHVSIKGDSSAVDKDNSIQQDLSAGSSGGSSVLESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSADLQGLRMQLQLLKLESEEYVEGPMVLSDEDGGEATTVMLEDNEFRRTEDSWETSYIIDVLSESGIDGAQPDTISEVWHSLECPVSLSVFDELEKRYSDWTTCSRSQRRLLFDRLNLEIVKINEQSTCALPWVGPATTNVTGSNLIKNGFRDGLCRILESQGKVRDDALGKVLVRESEWLDLRGDIDVIGREVERLLLDDLVAEIVVGTLKFRT 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2325 980 MobiDBLite consensus disorder prediction 459 478 - -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 674 741 - -
Ssu7g2325 980 Pfam Domain of unknown function (DUF4378) 820 970 IPR025486 -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 21 40 - -
Ssu7g2325 980 Pfam DUF761-associated sequence motif 84 105 IPR032795 -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 421 488 - -
Ssu7g2325 980 PANTHER AFADIN 23 973 - -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 76 147 - -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 104 128 - -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 1 56 - -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 587 619 - -
Ssu7g2325 980 PANTHER AFADIN 23 973 - -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 423 458 - -
Ssu7g2325 980 MobiDBLite consensus disorder prediction 666 741 - -
Ssu7g2325 980 Coils Coil 762 782 - -
Ssu7g2325 980 Pfam Protein of unknown function (DUF3741) 187 231 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2325 Ssu-Chr7 45670174 45675826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2325 68 976 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 37.927 5.41e-146 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2325 - - ccaj:109788117 1555.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1098 4 17455584 17460929 Ssu7g2325 7 45670174 45675826 PCT