Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2318 ATGTCTCAAGCACTTTCACATAAGTCAGAAGCTGTGAACGAGAAAGAGTTAGTTAGATCTAGTTCTAATTTACTTCCAAGTTCAGCTCAGACATCTGTACCTGAAACTGAAAATGTTCCCAAGACAAAAGAGGagataaaaatgtctaaaaaagCTACTTCAAGCAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTATAAGGCGTGGTCACAGGAGGTAAAATTTAGTATTAATGAGTTCATCTTTCACAGTAGCTTATCTTTCATCACATGTCTGGTTCTTCTTCCTATGCTTGTTAGAAGGAACTTCGAGGTGTTATAA 354 0.3644 MSQALSHKSEAVNEKELVRSSSNLLPSSAQTSVPETENVPKTKEEIKMSKKATSSNFPSNVRSLLSTGMLDGLSVKYKAWSQEVKFSINEFIFHSSLSFITCLVLLPMLVRRNFEVL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2318 117 PANTHER PROTEIN, PUTATIVE-RELATED 1 83 - -
Ssu7g2318 117 MobiDBLite consensus disorder prediction 16 37 - -
Ssu7g2318 117 PANTHER AUTOIMMUNE REGULATOR 1 83 - -
Ssu7g2318 117 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2318 Ssu-Chr7 45475456 45475809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2318 38 102 PHD Transcription Factor Family AT3G53680 41.538 4.79e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2318 - - gmx:100794765 142.895