Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2317 ATGGAGAACCACCAGACACAAAATTGGTTCGAAAGAGCGAAGCCGTTCGCAGCTGTGGTATCTTTACAGTTAGGATATGCAGTTATGGATGTTCTATCCAAGGCTGCAATGAACAAGGGGATGAGCAATTATGTGTTTGTCTTTTACCGCCATGCTGTTGCATTCTTTGTCATAGCCCCTTTTGCATGGTTTTTTGACAAGAAAGTAAGGCCAAAGATGACCTTGTCAATTTTCATGAAGATAGTGATGCTCAGCTTGCTAGAGCCAGTTATTGACCagaatttgtattttttgggGATGAAGTACACAACAGCAACCTTTGCCGTTACCATGACCAATATCGTTCCCGCCATTATCTTTATCTTCGCATGCATTCTTAGGCttgagaagataaaaataagaagtataCACAGCCTAGCAAAGGTGGTAGGAACTTTAGCAACTGTTTCGGGTGCCATGGTCATGACACTGATGAAAGGTCCAGTACTTTTCGGGTCACACAGAAGCAATGATCCCAGCCAGCATAATGGGACAAGTACTCAACATTCAATAACGGGATCCGTAATGATCGCAATTGGATGCTTTAGTTGGGCCTGCTTCATTATCCTACAGACTATTACGCTTAAAACCTACCCTGCTGCACTCTCTCTTTCTGCGTGGATATGCTTATTGGGCACAATTGAAGGTGCCGCAGTGGCTATGATTATGGAAAGGGGCAACCCTTCAGTTTGGTCTCTAAAATTGGATATCAGACTGCTCTGTGCTGTCTACACTGGCATAGTCTGCTCGGGAGTGTGTTATTACTTGCAAGGAGTAGTGATGAAAACTAGAGGCCCAGTCTTCGTAACCGCTTTCAATCCCCTCACCATGATAATCGTGGCTATCATGGGCTACTTTTTTCTGGCCGAGCAAGTGCTCCTCGGAAGAATGATCGGAGCAGTTATCATTTGTTTGGGCCTGTACGCTGTTGTGTGGGGTAAAAGCAAAGATTACAGCCCACCAAACCCAACAAGTCCAGAGCCCATATTACCGGCTAAGCAAATAGTGGACGAGTACAATGCTAAGAATGAAAATTGCACTCACGAAATCGTCACCGTCAACAATTTTGGAAACGGAACCACTACTCGAAATGAAGAACAAGTGTGA 1146 0.4328 MENHQTQNWFERAKPFAAVVSLQLGYAVMDVLSKAAMNKGMSNYVFVFYRHAVAFFVIAPFAWFFDKKVRPKMTLSIFMKIVMLSLLEPVIDQNLYFLGMKYTTATFAVTMTNIVPAIIFIFACILRLEKIKIRSIHSLAKVVGTLATVSGAMVMTLMKGPVLFGSHRSNDPSQHNGTSTQHSITGSVMIAIGCFSWACFIILQTITLKTYPAALSLSAWICLLGTIEGAAVAMIMERGNPSVWSLKLDIRLLCAVYTGIVCSGVCYYLQGVVMKTRGPVFVTAFNPLTMIIVAIMGYFFLAEQVLLGRMIGAVIICLGLYAVVWGKSKDYSPPNPTSPEPILPAKQIVDEYNAKNENCTHEIVTVNNFGNGTTTRNEEQV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2317 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 146 - -
Ssu7g2317 381 Pfam EamA-like transporter family 24 143 IPR000620 GO:0016020|GO:0016021
Ssu7g2317 381 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Ssu7g2317 381 PANTHER WAT1-RELATED PROTEIN 10 346 IPR030184 GO:0016021|GO:0022857
Ssu7g2317 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 328 - -
Ssu7g2317 381 PANTHER WAT1-RELATED PROTEIN 10 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2317 Ssu-Chr7 45469049 45474349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2317 1 378 Nodulin-like Gene Family AT2G37460 59.211 8.79e-160 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2317 - - gmx:100811147 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1111 4 17659899 17662540 Ssu7g2317 7 45469049 45474349 PCT