Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2304 ATGCCATTGAACATCACCTCCATCAAAACATCCTCCAACGGACTATGGCAAGGAGACAACCCATTAAACTTCGCCTTCCCTCTCCTCATAGTCCAAATCACCTTAATCATCCTCGTCAGCCGCACCCTCGCTTTCCTCTTCAAACCTCTCCGCCAACCTAAAGTCATCGCGGAGATTGTCGGCGGGGTTGTGCTGGGTCCATCGGTCCTGGGAAGGAACAAAACCTACTTGCACCGCGTGTTCCCGTCATGGAGCACGCCGTTGCTGGAATCAGTGGCAAGCATGGgtcttctcttcttcttgttcttaGTGGGTCTCGAACTCGACTTGGTCTCGATTCGCCGAAGTGGCAGAAGAGCTTTGAGCATCGCCGTCGCCGGAATGTCCCTCCCCTTCGTCTCCGGCCTCGGCCTCGCCGTCATCCTCCGCAAGACCGTCGCCGGCGCCAACCAAGTCGGCTTCGCGCCGTTCCTCGTCTTCATGGGCGTCGCGATTTCGATCACGGCCTTCGCCGTGCTCGCCCGCATCCTAGCCGAGCTCAAGCTCCTCACCACCAGCGTCGGCGGCACCGCCATGGCCGCCGCCGCGTTCAACGACGTCGCCGCCTGGATCCTCCTCGCGCTCGCCATCGCGCTCGCCGGCGACGGTGCCAGCCACGTGCACAAGAGCCCCCTCGTGTCGCTCTGGGTGCTCCTCTCCGGCGTGGCGTTCGTGGTCTTCATGATGGCAGCAGTCAAGCCGGCGATGAGATTCGTCGCCGGACGGTGGTCGCCGGCGACCGGCGCCGTGGATGAGACCTACGTGTGCCTCACGCTGATGCTCGTGATGGTGTTCGGGTTCGTGACGGACATGATTGGGATCCATTCGGTTTTCGGCGCGTTCGTGTTCGGGATAACGGTTCCGAAGGGTGCGTTTGCGGCGAGGTTGACGGAGAGGGTTGAGGACTTCGTTGTGGGGTTGTTGTTGCCGTTGTATTTCGCTTCGAGTGGGTTGAAGACGAACGTGGCTACGATAAGTGGCGCCAAAGGGTGGGGGATTCTGGCGCTGGTGATAGCGACGGCGTGCGCCGGGAAGATAGTGGGTACGTTTGTGACGGCGGTGGCGTGCAGGATTCCGACCAGGGAGGCCTTGACGCTGGCGGTGCTTATGAACACTAAGGGGCTGGTGGAGCTCATCGTCCTCAACATTGGGAAGGAGAAAAAGGTGTTGAACGATGAAATGTTTGCAATTTTGGTACTTATGGCTCTATTCACCACCTTCATCACAACCCCAATAGTGTTGTCCATCTATAAAAACACTGATGGCAAATCTTCTCGGACTCTTAGCAAATTAGGTGACCTTGACTCTAATGACAAAGCCACTAACGAGCTTCGAGTCTTAGCATGTGTGCATGGCCCCCACAATGTTCCTTCCATCATTAGCCTCATTGAGTCTACTCGGAACACAAAAAAATCCTCTATCAAACTCTTCATCATGCACCTTGTTGAGCTCACAGAGCGCTCTTCCTCCATCATCTTGGCTCAAAACACTAATAAGAATGGTTCTACTTTCTATCACTCTAGCCATGTCGAGTGGCTACACGAAATCTATAGGACCTTCCAAGCCCACAGTCAATTGGGTCAAGTTTCGGTTCAATCCAAGACCACTATCTCTTCGTTGTCCACTATGCATGATGATATCTGCCACGTGGCAGATAAGAAAATGGTGACCATGATCGTCTTGCCCTTCCACAAGGGATGGAGGAAggtggaaatggaaaatgaagaagagaacaatgaggTTACCCAACACCAAACGGTGGAAAATATTGGTCATGGGTGGAGAGGTGTGAACCAGAGGGTGCTTAAGAATGCACCTTGCACTGTGGCTATGCTTGTTGACCGAGGATATGGACAGGAGCCTCAGAACTTGGGCCCATCTACCACTGTGACCCAACATGTTTGTGTTTTGTTCTTTGGCGGGCCTGATGATCGTGAGGCCTTGGAGTTGGGGGATAGAATATCTAACCACCCTACAGTTAAAATGAATGTTGTGAGGTTCATTAACAAAGATGTGTTGGAGGGTAATGACGTGTCACACCCTTCACCAAGCAAAAGTAGTGAGAAAAGCCACAATTTAGCCATTGCTAAAATGAACCCTCAAGAGGAAAagGAACTAGATGATGCAACAATGGCAAGATTCCAAAGCAAGTGGTCTGGAATGGTAGAGTGTGTTGAGAAGGTAGCTAGCCATATTATGGAAGAGGTGTTGGAATTAGGGAAAAATAAGGATTATGATCTCATAATTGTTGGGAAAGGTCGATTTCCGTCGAGTTTGGTGGCAGATTTGGTAAATAGGCAGGTAGAGCACGAGGAATTAGGTCCGATTGGAGACATTTTAGCATCATCGACACATGATGTGGTTTCTTCAATTCTAGTAATTCAACAGCATGATATGGTACAGAACGAGGAGACTCCTTTATCTATGAGAAATGATAGTATAATATAG 2487 0.5062 MPLNITSIKTSSNGLWQGDNPLNFAFPLLIVQITLIILVSRTLAFLFKPLRQPKVIAEIVGGVVLGPSVLGRNKTYLHRVFPSWSTPLLESVASMGLLFFLFLVGLELDLVSIRRSGRRALSIAVAGMSLPFVSGLGLAVILRKTVAGANQVGFAPFLVFMGVAISITAFAVLARILAELKLLTTSVGGTAMAAAAFNDVAAWILLALAIALAGDGASHVHKSPLVSLWVLLSGVAFVVFMMAAVKPAMRFVAGRWSPATGAVDETYVCLTLMLVMVFGFVTDMIGIHSVFGAFVFGITVPKGAFAARLTERVEDFVVGLLLPLYFASSGLKTNVATISGAKGWGILALVIATACAGKIVGTFVTAVACRIPTREALTLAVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVLSIYKNTDGKSSRTLSKLGDLDSNDKATNELRVLACVHGPHNVPSIISLIESTRNTKKSSIKLFIMHLVELTERSSSIILAQNTNKNGSTFYHSSHVEWLHEIYRTFQAHSQLGQVSVQSKTTISSLSTMHDDICHVADKKMVTMIVLPFHKGWRKVEMENEEENNEVTQHQTVENIGHGWRGVNQRVLKNAPCTVAMLVDRGYGQEPQNLGPSTTVTQHVCVLFFGGPDDREALELGDRISNHPTVKMNVVRFINKDVLEGNDVSHPSPSKSSEKSHNLAIAKMNPQEEKELDDATMARFQSKWSGMVECVEKVASHIMEEVLELGKNKDYDLIIVGKGRFPSSLVADLVNRQVEHEELGPIGDILASSTHDVVSSILVIQQHDMVQNEETPLSMRNDSII 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2304 828 Pfam Sodium/hydrogen exchanger family 34 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu7g2304 828 PANTHER BNAC06G14930D PROTEIN 3 815 - -
Ssu7g2304 828 Gene3D - 28 438 IPR038770 -
Ssu7g2304 828 PANTHER CATION/H + ANTIPORTER 3 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2304 Ssu-Chr7 45257696 45266559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2304 76 821 Antiporter Super Family AT3G53720 61.192 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2304 - - gmx:100805993 1296.57