Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2284 ATGGGAGAAGTGAAGCTACTTGGAGTTTGGCCTAGTCCATACGTTTACAGAATCATATGGGCTTTAGAGCTGAAGGGAGTAAAGTATGAGTATGTAGAAGGAGAATTCCACAAGATCGATTTCACTGATTTGCTATTGAAGTATAACCCAGTTTACAAAAAGGTTCCAGTCCTTGTTCTTGATGGAAAGCCAATCGCTGAATCCACTGTTATTCTTGAATACATAGAGGAAACATGGCCACAGCCACCCTTGCTTCCGCAGGACCCGTATGAGAGGGCCGTGGCACGGTTCTGGGTTAGTTTTGCAGAGGAAAAGAGCATTTCGTTTATGTCATTCTTTGTGACTGTTGGAGAAGAGTTTCAGAAGGCAACGAGGGAAGTTAGAGAAGTGCTCAAAACATTAGAAGAAACCATTGGGGACAAAAAGTATTTTGGTGGCGAAGAAATTGGACTGTTAGACATAATCTTGGGATGGATAGCCTTGTCATTTGGAGTCATTGAAGATGTTGTTGGTGTTAAAGTGTTGGTTGTCAATGATTTCCCTCGCTTGTATACTTGGATTCGGAACTTCAGGGAGCACCCCGCTATCAAAACAAACCTTCCAAGTCACCAAGAGTTGCTTGATTATTACAAGCAAAAGAGGGAGACTATTATTCCATCCGGAATGGCGTGA 672 0.4271 MGEVKLLGVWPSPYVYRIIWALELKGVKYEYVEGEFHKIDFTDLLLKYNPVYKKVPVLVLDGKPIAESTVILEYIEETWPQPPLLPQDPYERAVARFWVSFAEEKSISFMSFFVTVGEEFQKATREVREVLKTLEETIGDKKYFGGEEIGLLDIILGWIALSFGVIEDVVGVKVLVVNDFPRLYTWIRNFREHPAIKTNLPSHQELLDYYKQKRETIIPSGMA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2284 223 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
Ssu7g2284 223 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Ssu7g2284 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Ssu7g2284 223 Gene3D Glutaredoxin 1 87 - -
Ssu7g2284 223 SFLD Glutathione Transferase (cytosolic) 1 217 IPR040079 -
Ssu7g2284 223 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Ssu7g2284 223 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Ssu7g2284 223 CDD GST_N_Tau 4 79 - -
Ssu7g2284 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Ssu7g2284 223 Gene3D - 88 220 - -
Ssu7g2284 223 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Ssu7g2284 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Ssu7g2284 223 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Ssu7g2284 223 PANTHER - 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2284 Ssu-Chr7 44909860 44910616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2284 3 217 Glutathione S-transferase Gene Family AT2G29420 43.056 3.71e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2284 K00799 - gmx:100500361 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2284 7 44909860 44910616 Ssu7g2284 7 44909860 44910616 ECH