Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2282 ATGGAGAACCTGTTTCGCCTGGTTGACTACGAGGACCTGCCCTCAAAACGGTGCATTTGGGTCAACGGTCCCGTGATCGTAGGCGCGGGTCCTTCGGGGCTAGCCACAGCAGCGTGTCTCAAACAACAAGGGGTGCCCTTCATGGTTCTCGAGCGGGCAGAATGCATAGCCTCCCTATGGCAAAAACGCACCTACGACAGGCTCAAGCTCCACCTTCCGAAACAGTTCTGCCAGCTCCCGAACCTTCCCTTCCCGCAGGACTTCCCCGAGTACCCCACCAAGAAACAGTTCATCGACTACCTCGAATCCTACGCGCGACGCTTCGAGATCAGCCCGAGATTCAACGAGCGCGTCCAGTCCGCGAGGTACGACGAGACCAGCGGGCTGTGGAGGGTCAAAACCGTCGCCGCGAGGAACGAGTTTGAGTACATCTGCAGGTGGCTCGTGGTGGCCACCGGCGAGAATGCGGAGTGCGTGATGCCCGAGATTGAAGGGCTGGGGGACTTCAAAGGTGACGTCATTCACGCCTGTGAGTACAAGTCCGGGGAGAGCTTCAAGGGGGAGAAAGTGCTTGTCGTTGGTTGTGGCAATTCCGGCATGGAACTCTCACTTGACTTGTGTAACCACAGTGCTTCTCCTTCCATCGTTCTCCGTGGCTCGGTTCATGTGTTGCCTAGAGAGGTGTTTGGGAAGTCGACGTTTGAATTGGCGGTTTTGATGATGCAATGGTTGCCAGTTTGGATCGTGGACAAGATCCTATTGGTGTTGGCAAGGTTGGTGCTGGGCAACATAGAGAGATTTGGGCTCAAAAGGCCTTCGGAGGGTCCATTGGAGTTGAAGAACACAAAGGGGAAGACCCCTGTTTTGGACATTGGTACCTTGGAGAAAATTCGATCCGGTGACATAAAAGTTGTGCCAGGAATTAAGAGGTTCGCCAATGGCTGCGTTGAGTTTGTTAATGGGGAAAGGCAAGACGTTGATGCAGTGGTGCTTGCAACCGGGTACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAGTTTTTCTCCAAGAATGGTTTCCCAAAGTCTCCGTTCCCTAATGGTTGGAAGGGAAATGCTGGGCTTTATGCTGTTGGGTTCACAAGGAGAGGGCTCTCTGGTGCCTCATCTGATGCTATGAAAATTGCTCAAGATATTGGCCAAGTCTGGAAACTAGAGACTAAGCAAAAGAAACACCGCACCACTGCTTGTCATAGACGTTGCATTTCCCAGTTCTGA 1260 0.5317 MENLFRLVDYEDLPSKRCIWVNGPVIVGAGPSGLATAACLKQQGVPFMVLERAECIASLWQKRTYDRLKLHLPKQFCQLPNLPFPQDFPEYPTKKQFIDYLESYARRFEISPRFNERVQSARYDETSGLWRVKTVAARNEFEYICRWLVVATGENAECVMPEIEGLGDFKGDVIHACEYKSGESFKGEKVLVVGCGNSGMELSLDLCNHSASPSIVLRGSVHVLPREVFGKSTFELAVLMMQWLPVWIVDKILLVLARLVLGNIERFGLKRPSEGPLELKNTKGKTPVLDIGTLEKIRSGDIKVVPGIKRFANGCVEFVNGERQDVDAVVLATGYRSNVPSWLQEGEFFSKNGFPKSPFPNGWKGNAGLYAVGFTRRGLSGASSDAMKIAQDIGQVWKLETKQKKHRTTACHRRCISQF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2282 419 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 16 417 - -
Ssu7g2282 419 SUPERFAMILY FAD/NAD(P)-binding domain 188 373 IPR036188 -
Ssu7g2282 419 Gene3D - 24 402 IPR036188 -
Ssu7g2282 419 PRINTS Pyridine nucleotide disulphide reductase class-II signature 185 209 - -
Ssu7g2282 419 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Ssu7g2282 419 SUPERFAMILY FAD/NAD(P)-binding domain 25 298 IPR036188 -
Ssu7g2282 419 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Ssu7g2282 419 PRINTS FAD-dependent pyridine nucleotide reductase signature 189 207 - -
Ssu7g2282 419 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 16 417 - -
Ssu7g2282 419 Pfam Flavin-binding monooxygenase-like 26 340 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2282 Ssu-Chr7 44864646 44866624 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2282 K11816 - gmx:100807325 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2282 7 44864646 44866624 Ssu7g2282 7 44864646 44866624 ECH
Ssu7g2282 7 44864646 44866624 Ssu4g1150 4 18318070 18319857 PCT