Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2277 ATGGATGAGAAAGCcaagaaaaagaggagaaaagatGTTGAAGTAATGAATAGTAATGTTGCTGATGATAAAGAAGTGCAGTTCTTGGATGATAACCAAGAAAGcaagatgaagaaaagaaaaaaatatgattcttCATTGAATGGAGTGCAAGAATTGGGTTTTTCAAAACCAAGCAAAAAAATGAGGAAGGATAATGGGTTAAAAAACAATGAAGGTGACGATGATGACCAAGTCAAGCAGATGATGAAGGAGAAGAAATCGGGTGAAGAAAGCCAACGTGAGGATCACAATGaatttaaaagcaaagaaaataaagatgatgGCCaatacaagaagaagaagaggaaactGAGTGAAGAAAGCAAAAATAAGGAGTATAATGAGTTTGAAAGCAACGAAGGTGGAGATGATGACCACGgtaagaagatgaagaagaagaagaaactgtGTGACAAAGGCAAAAGTAAGGAGAATCGTGACTTCAATAGCAAgcagatgaagaagaagaagaaatcaggTGAAGAAAGCCAACATGAGGATTACAATGAATTTAAAAGCAATGAAGATAAAGATGATGGTCAATACAAGAAGgaggaaaagaagaggaagaagaagaaaaaactgaGTGAAGAATTCAAAAGTAAGGAGTATAATGAGTTTGAAAGCAATGAAGGTGAAGATGATGGCCAAGGTAAGaatataaagaagaagaaactgcgtgacaaaagcaaaaataaggAGAATAGTGAGTTGAATAGCAATGATGGTGATCCACCTTCAGCTAGAGTCAAGTCAAGAGATGGTAATGCACAATGCATTGTCACTGAAGTTGATGATCAAAGCAAGAAGATGAAGACAAAGAAGGCTAAGGCAGATACTGATGAATCTCCTAATCCTGCACACAGTGGATCATCCAAACCTAAACGAGTAACTTTTTCTGATCAAGTGGATGTTTGTTGTGATGGCTTAGTGCGTGGGAGAAGGTTTACACCAGAAGAAGATGAGAAGATTAAATTGGCTGTTTTTGACTATATAGAGTCTCATGGTTTGGGAGATGAAGGTCTGGATATGGTTCTCCATTGCAAATCTCATCCTGAAATTAGAGATTGTTGGAAGGAAATTGGAGCAGCCTTACCTGAGAGGCCTAATGTTAGTGTGTATTCTCGTGctcatattttgtttgaaagaGGTGAGAAGCGTAGGTGGACACCTGAAGAGCTTGAATTTTTACGGAAGGTCCAGGAACAACATGGATCTGATTGGAAATCAGTAGCTGAAGCATTGGGCAAACATCGATTTCATGTAAAGGATACGTGGCGtagaataaaattaaccaaTACAAACAAAGGACGATGGACCCAAGACGagtatcaaaatttatttgatttagtaAACCTGGATCTACGTGTGAGAGCTTCACAGggttataaaaaatcaaaacatggTATGTTGCGAGATAATATTGGTTGGGAGGCAATTGGTGACAAATTGTCCACTAGATCGAGTGCACTCTGCTGCCAAAAGTGGTATGATCAATTAACATCACCTATGGTTGCTAATGGTGTATGGAGTGATACCGATGACTATGGCTTGGTAAATGCTTTATTTACTTTAGATGCTTGTTGCATGGAGGAGGTAGATTGGGACAATTTGCTTGAGCACAGGCCTGGTGATGTATGTAGAAAACGATGGAACCAAATGGTCCAATATATTGGAGAGCATGGGGGGAAGTCATTTGCCGAGCAGGTTGAAATTCTTGCAAAAAGATTTTGTCCCGATTTATTGGAAGTAAGAGAGGCCCTTGATGAAAAGCCTGTCGTTTGTTGA 1830 0.335 MDEKAKKKRRKDVEVMNSNVADDKEVQFLDDNQESKMKKRKKYDSSLNGVQELGFSKPSKKMRKDNGLKNNEGDDDDQVKQMMKEKKSGEESQREDHNEFKSKENKDDGQYKKKKRKLSEESKNKEYNEFESNEGGDDDHGKKMKKKKKLCDKGKSKENRDFNSKQMKKKKKSGEESQHEDYNEFKSNEDKDDGQYKKEEKKRKKKKKLSEEFKSKEYNEFESNEGEDDGQGKNIKKKKLRDKSKNKENSELNSNDGDPPSARVKSRDGNAQCIVTEVDDQSKKMKTKKAKADTDESPNPAHSGSSKPKRVTFSDQVDVCCDGLVRGRRFTPEEDEKIKLAVFDYIESHGLGDEGLDMVLHCKSHPEIRDCWKEIGAALPERPNVSVYSRAHILFERGEKRRWTPEELEFLRKVQEQHGSDWKSVAEALGKHRFHVKDTWRRIKLTNTNKGRWTQDEYQNLFDLVNLDLRVRASQGYKKSKHGMLRDNIGWEAIGDKLSTRSSALCCQKWYDQLTSPMVANGVWSDTDDYGLVNALFTLDACCMEEVDWDNLLEHRPGDVCRKRWNQMVQYIGEHGGKSFAEQVEILAKRFCPDLLEVREALDEKPVVC 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2277 609 MobiDBLite consensus disorder prediction 57 145 - -
Ssu7g2277 609 PANTHER GB|AAC33480.1 3 609 - -
Ssu7g2277 609 MobiDBLite consensus disorder prediction 279 296 - -
Ssu7g2277 609 MobiDBLite consensus disorder prediction 210 236 - -
Ssu7g2277 609 MobiDBLite consensus disorder prediction 154 199 - -
Ssu7g2277 609 MobiDBLite consensus disorder prediction 1 311 - -
Ssu7g2277 609 ProSiteProfiles Myb-like domain profile. 516 569 IPR001005 -
Ssu7g2277 609 MobiDBLite consensus disorder prediction 1 46 - -
Ssu7g2277 609 Gene3D - 444 519 - -
Ssu7g2277 609 SUPERFAMILY Homeodomain-like 494 572 IPR009057 -
Ssu7g2277 609 SMART sant 326 397 IPR001005 -
Ssu7g2277 609 SMART sant 399 446 IPR001005 -
Ssu7g2277 609 SMART sant 449 516 IPR001005 -
Ssu7g2277 609 Gene3D - 404 443 - -
Ssu7g2277 609 CDD SANT 402 431 IPR001005 -
Ssu7g2277 609 ProSiteProfiles Myb-like domain profile. 395 444 IPR001005 -
Ssu7g2277 609 Pfam Myb-like DNA-binding domain 403 461 - -
Ssu7g2277 609 ProSiteProfiles Myb-like domain profile. 445 514 IPR001005 -
Ssu7g2277 609 SUPERFAMILY Homeodomain-like 400 461 IPR009057 -
Ssu7g2277 609 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 400 448 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2277 397 570 MYB Transcription Factor Family AT4G32730 26.667 2.34e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ssu7g2277 Myb_DNA-bind_6 3.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2277 - - gmx:100785842 925.235