Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2275 ATGACGAAGAGAGTTGGGGTGGCGATCCTCCAAGATTGTGGGTTCTTAATGGGATGGGGAAAATCAAAATGGGGAAGAACTAGGGTTTCTATGCGTGGCACCACTACAATTACGGTGCTTGTTATTGGTGACACCCTTTATGTTGCTAATGTTGGTGATTTGAGAGCGGTGCAGGTTGTTAAGGATGGGAATCACATTGTTGTTGAGGACTTGTCCTCCGATCATACGCCATTTTGGAGAGATGAATATGAGAGAGTGAAGCTTTGTGGGGCAATAGTGTTGAGTGTTGATCAAGTGGAAGTTTTCAAGGATCGAGATATCTAG 324 0.4444 MTKRVGVAILQDCGFLMGWGKSKWGRTRVSMRGTTTITVLVIGDTLYVANVGDLRAVQVVKDGNHIVVEDLSSDHTPFWRDEYERVKLCGAIVLSVDQVEVFKDRDI 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2275 107 SUPERFAMILY PP2C-like 28 94 IPR036457 -
Ssu7g2275 107 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 30 103 - -
Ssu7g2275 107 Pfam Protein phosphatase 2C 29 92 IPR001932 -
Ssu7g2275 107 ProSiteProfiles PPM-type phosphatase domain profile. 1 107 IPR001932 -
Ssu7g2275 107 Gene3D - 19 106 IPR036457 -
Ssu7g2275 107 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 30 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2275 Ssu-Chr7 44737416 44738508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2275 30 107 PP2C-type Phosphatase Gene Family AT3G06270 70.513 1.57e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2275 - - gmx:100797866 125.561