Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2263 ATGAGAAGGCGCCCTGACCAACTGGATAAAGGGGCAGCAAAGAACCAGAATTCCCGCCTTTGCTGTTTGGCATCCCTTTCTGCATTCTTCTGGTTCTTGCTCCTTTACTTCCATTTTGTGGTCCTTGCAGGagataataatactaatacCAATAgcaagaataattataataatcatgtTGATCACTCAACCCTATCAACAACACCTGTTTCTGTTAACTATGAACCTGCCCCAATCCACGTGACTGATGCCCCTCCTAGAAAGATTGGCTTCCCTGAACCCGAGGTGCGACGGAGTGACACTGACACTCCTCGCACCGAGAAGAATTTCCCTTTTGTGGGAGCATTGAGAACTGCTGAAAACAAGAGCGATCCCTGTGGGGGGAGGTACATTTACGTGCATGACCTTCCCTCCAGGTTTAATGAGGATATGTTGAAGGAGTGCAAGAGTTTGAGTCTTTGGACTAATATGTGCAAGTTCACCACCAATGCTGGCCTTGGTCCGCCTCTCGAGAATGTTGAAGGGGTGTTCTCTGATACTGGCTGGTACGCTACGAATCAGTTTGCTGTTGATGTGATATTCAGCAATCGCATGAAGCAGTATGAGTGCTTGACAAAGGATTCATCTATGGCTGCTGCAGTTTTTGTGCCCTTTTATGCTGGATTTGACATAGCGCGTTATCTCTGGGGCTATAATATTTCAGTGAGGGATGCTGCTTCGCTTGATCTGGTTGACTGGCTCATGAAGAGGCCAGAGTGGAGCGTAATGAATGGCAGAGACCATTTTCTTGTTGCGGGAAGGATAACGTGGGATTTCAGGAGATTATCTGAGGAAGAATCAGACTGGGGCAATAAGCTTCTGTTTTTACCAGCGGCAAAGAATATGTCCATGCTTGTGGTGGAGTCCAGCCCCTGGAATGCCAATGATTTTGGGATTCCATATCCTACGTACTTCCATCCTGCAAAGGATGCTGATGTGTTCATTTGGCAGGATAGAATGAGGCAACTAGAGAGGAAGTGGCTTTTCTCCTTTGCCGGTGCTCCCCGTCCTGGCAACCCCAAATCAATCAGGGGTCAGTTAATTGATCAATGCAAAAGGTCACAGGTTTGTAAGCTGTTGGAATGTGACTTTGGCGAAAGCAAATGTCATTCTCCCAGTAGCATAATGCAGATGTTTCAAAGCTCGCTTTTCTGCTTGCAACCCCAGGGTGATTCGTACACACGAAGATCTGCTTTCGATTCAATGTTGGCTGGTTGTATACCTGTCTTCTTCCATCCAGGCTCAGCATATACACAATATACTTGGCATCTTCCCAAGAATTACACCAAGTATTCTGTCTTCATTCCGGAGGATGATATTCGTAAGAGGAATGTCAGTATAGAGGAAAGGCTTAGTCAGATACCTCCTGAGCAAGTGAAGATCATGAGagaagaggtcattagtctcaTTCCAACACTAGTATATGCTGATCCTCGCTCCAAATTAGAAACTCTTAAAGATGCATTTGATGTTGCTGTACAAGCAGTAATTGACAAGGTTACAAATTTGAGGAAGGATATTATTGAAGGTCGCACAGATGAGAACTTCATTGAGGAGAACAGTTGGAAATATGCTTTGTTGCCTGAGGGAGAGCATGAGGTAGGGCCTCATGAATGGGATCCTTTCTTCTCGAAACCAAAGGATGGTAGTGGAGATTCCAATGATTCCTCTTCGGAAGCTGCAAAAAATTCTTGGAAGAATGAGCAAAGAAATCAATCATGA 1761 0.439 MRRRPDQLDKGAAKNQNSRLCCLASLSAFFWFLLLYFHFVVLAGDNNTNTNSKNNYNNHVDHSTLSTTPVSVNYEPAPIHVTDAPPRKIGFPEPEVRRSDTDTPRTEKNFPFVGALRTAENKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENVEGVFSDTGWYATNQFAVDVIFSNRMKQYECLTKDSSMAAAVFVPFYAGFDIARYLWGYNISVRDAASLDLVDWLMKRPEWSVMNGRDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFIWQDRMRQLERKWLFSFAGAPRPGNPKSIRGQLIDQCKRSQVCKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNVSIEERLSQIPPEQVKIMREEVISLIPTLVYADPRSKLETLKDAFDVAVQAVIDKVTNLRKDIIEGRTDENFIEENSWKYALLPEGEHEVGPHEWDPFFSKPKDGSGDSNDSSSEAAKNSWKNEQRNQS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2263 586 MobiDBLite consensus disorder prediction 76 107 - -
Ssu7g2263 586 MobiDBLite consensus disorder prediction 562 586 - -
Ssu7g2263 586 MobiDBLite consensus disorder prediction 90 105 - -
Ssu7g2263 586 Pfam Exostosin family 126 463 IPR040911 -
Ssu7g2263 586 MobiDBLite consensus disorder prediction 546 586 - -
Ssu7g2263 586 PANTHER BNAA09G10260D PROTEIN 12 540 - -
Ssu7g2263 586 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 12 540 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2263 Ssu-Chr7 44558475 44560235 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2263 K20888 - gmx:100780467 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2263 7 44558475 44560235 Ssu7g2263 7 44558475 44560235 ECH
Ssu4g1176 4 18822695 18825010 Ssu7g2263 7 44558475 44560235 PCT