Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2255 ATGGCACCAAATAAAAGAGTGGGTGCGGCCTATCGTGCAATGGCAAGTCTTGGGATTGATGAATCGAAAGTGAAATCAGTGTTAAAGCAACTCCTCAAAGTGTATGATAAAAATTGGGAACTTATTGAGGCAGAGAACTATAGAGTTCTAGCAGATGCTATATTTGAGGATGATGAAAAAAAGGTGCccgaactgaaaaagaaaagcCAGGCAGTTGATGTACATAACACTCATCATTCTTTGACTTCTTCCTTTTCAAACAACCAGGAAGAAGAGACAGAGTGTGAAGAGGCTCAGATACATGTTGAAACAGCCCGACCTTTGAAAAGGTTGCGATTAAGAGGCCAAGAGTTGCATCCTCTGACTAATAGTGCCCCCAGTCCTCCATCAAAAAAGCCTAAATTAGATGATGCTGCATTATCCGAGGGTTGTTCTGGGAAGAAGCCTCAAAACAAGGCAGTGTCACCTCATAGGAATATAAGGACTGAAGCACGCCCACTCCCACCACGAGATGGCTTTGTTGATAAGGGGAAGCAACCTGTATCACCCCAAGTTTCACACAGAGGAAGAAGACTTACATCTGAAAGAGTGTCTCCATCCACCCCATCTAAAGGACCAACAGTTGGACCAGGAAAGTTTCTGTTGCCAAACAACCAAATGCCTCGTAGTCACGCACTGATCATACCCAAGGATGAGCCCATTGATGAATTGCCTGATTACGAGATGCCCATTGCTGTGATTCCTCCTGaACCATCAAGTGTAAGGGActcatcaatgaagaatggcATAGCTGGAAAGCATGGTGACCATGTTACCGTGACATCTTCACAATGCAGAGATGGAATTAGAGACGAAGATGTTATTCATACCTCAAATGAAGAAGCGACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGGTAAAACTTTCTCTGAGCTGCAGCTCAGCTATTCAGGGATCAGATTTTCATATGCCTAGTCGAGATCAACTTCTAGAAATGATGGAGGATAAATGTCTGCGTTCATATAAAATCACTGACCCAAATTTTCTGTCATGA 1062 0.4162 MAPNKRVGAAYRAMASLGIDESKVKSVLKQLLKVYDKNWELIEAENYRVLADAIFEDDEKKVPELKKKSQAVDVHNTHHSLTSSFSNNQEEETECEEAQIHVETARPLKRLRLRGQELHPLTNSAPSPPSKKPKLDDAALSEGCSGKKPQNKAVSPHRNIRTEARPLPPRDGFVDKGKQPVSPQVSHRGRRLTSERVSPSTPSKGPTVGPGKFLLPNNQMPRSHALIIPKDEPIDELPDYEMPIAVIPPEPSSVRDSSMKNGIAGKHGDHVTVTSSQCRDGIRDEDVIHTSNEEATCNVEIASSTLGEVKLSLSCSSAIQGSDFHMPSRDQLLEMMEDKCLRSYKITDPNFLS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2255 353 Gene3D - 1 60 IPR043017 -
Ssu7g2255 353 Pfam Ubiquitin-binding WIYLD domain 4 60 IPR018848 GO:0018024
Ssu7g2255 353 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 309 - -
Ssu7g2255 353 MobiDBLite consensus disorder prediction 118 218 - -
Ssu7g2255 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2255 Ssu-Chr7 44481190 44482972 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2255 - - gmx:100778335 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0222 4 3696384 3706748 Ssu7g2255 7 44481190 44482972 PCT
Ssu7g2255 7 44481190 44482972 Ssu4g1187 4 18947467 18953975 PCT