Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2252 ATGCAGGTGCAGCAAGCGCAGAGAGTCCACGCTATCGAGATTGTTAGCACGCGAGTGGGTGGCGCGTGGATGAGGCTTAGGCATAGCATAGCAATAGGCAATAGCACAGTGAGAAGACAAAGCGAGCGCACTCGTGTCGTTGACGTTGATCACCGTTCACCTGCCGGTGACGGAATTCAAAAACACcgcctctttctctctctctctctctatctctcacCAGAATCTGTTCCATTCATCTTCTCTGGTTTCGATTCCCATTCGCTGGGAGGTGGTTCCTTATTGCAAGTGGCCTGTAGGCCATTGGTTTATCTTCTGGTATTTAAGCACCTGAAACCTCTTCACAGTTACATTTTCATTTCTCTAACTGGACAGAACAACATAAGGAAAATAATGGAAGCACATCCCACTTTCTCCATTGAAAGATCAAAGCAACTCAATAACATGGGGATGTCTGGAGCACTTTCTTCCTCCTTGTCAGTCCTTCCAGTACCCCCAGAAGAGATGTATCCCAAGCTGTCTGAATCGCAGTTGGATTTTGTAGAACAAGAGCTTATGACAAGACCTTTTACTCATTCAAGTTATTTAAATTCCAATGGAGCAGTTGGACATATTTTTTCGTCTTCCCCTGGATATTCAACTGATCTTCATCACTCATCTGTTTCACTTGATGAAAAACACTCTACTAATGCTCATTTTATTTCACCATCATCAACTAACATGGCCCAATTTCCATTATCATATTCTTCAAATCCTGGACCACCAACTTCAGCAACCTCAAACCATTATTCCAAGAAAACAGTGCTTCCTGGCATACAGATTCTCTGCCTAGCTTTCTGGATTTTTCTGCAAATAGCTCTATTGATAATAATCGGGTAG 879 0.413 MQVQQAQRVHAIEIVSTRVGGAWMRLRHSIAIGNSTVRRQSERTRVVDVDHRSPAGDGIQKHRLFLSLSLYLSPESVPFIFSGFDSHSLGGGSLLQVACRPLVYLLVFKHLKPLHSYIFISLTGQNNIRKIMEAHPTFSIERSKQLNNMGMSGALSSSLSVLPVPPEEMYPKLSESQLDFVEQELMTRPFTHSSYLNSNGAVGHIFSSSPGYSTDLHHSSVSLDEKHSTNAHFISPSSTNMAQFPLSYSSNPGPPTSATSNHYSKKTVLPGIQILCLAFWIFLQIALLIIIG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2252 292 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 154 266 IPR044848 GO:0003700
Ssu7g2252 292 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 154 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2252 Ssu-Chr7 44410149 44412495 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2252 - - gmx:100793593 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2252 7 44410149 44412495 Ssu7g2252 7 44410149 44412495 ECH
Ssu7g2252 7 44410149 44412495 Ssu4g1191 4 18988459 18993134 ECH
Ssu4g1191 4 18988459 18993134 Ssu7g2252 7 44410149 44412495 PCT
Ssu4g0219 4 3681788 3684619 Ssu7g2252 7 44410149 44412495 PCT