Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2240 ATGGAGCATGTGATTGGTGGGAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGTGTTAATGTACAAACTGGAGAGGAGGTGGCCGTTAAGCTGTGGTTTGGAGTCGAGGGAGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTAGAagatttattcaattattgtaACCGGAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGGTGTATGCCATTGACTATGGCCttgcaaaaaaatatagggaTCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCCTAAGAGGAAGtcTTCCCTGGCAGGGACTGAAGGCTGgcaccaaaaaacaaaaatatgataaaatcaGTGAGACAAAGGTGTCAACTCCCATAGAGGTGCTCTGCAAATCATATCCCTCTGAGTTTGTATCATACTTCCACTATTGCCGATCATTGCGGTTTGAGGACAAGCCGGATTATTCGTATTTAAAGAGACTTTTCCGAGACCTATTTATTCGAGAAGGCTATCAATTTGACTACATTTTCGACTGGACAATGTTAAAGTATCCACAGATTAGTGGCAGCTCTAGAGGGCGGCATGGCACTGGCAAGGCAGCTATGCATGCAGGTCCACAAGCACAAAAACCAGAAAAGATCGCAGTTGGGAAAGAGATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCCGGAGGAACCCTGTAACTTCAAGTCCTCGTGGTGACCACACCAAACATAGGAGTTTTGAGGATGTAGGAGTACAAAAGGATTTGCACTATGCTCAACACAATTCCACTCGATATGGCAGCAGTTCAAGAAGAGCCATGATCTCATCAAACAAGGCAATTTCCTCCGGTGACCATACTGGCAGGCCAACCTTTGGTGGGGGCCGTCCATCTGGTGCTCATAGAATTCAACCTGTGTATGACACCAAACAAGCAACTTATACGCGCAATGGCTCTGTAAGAGGCAACCGCGATGATCCTCTGCGGAGCTTTGAGCTCCTCAATATCaggaagtaa 1176 0.4294 MEHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISGSSRGRHGTGKAAMHAGPQAQKPEKIAVGKEIREKFSGAVEAFSRRNPVTSSPRGDHTKHRSFEDVGVQKDLHYAQHNSTRYGSSSRRAMISSNKAISSGDHTGRPTFGGGRPSGAHRIQPVYDTKQATYTRNGSVRGNRDDPLRSFELLNIRK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2240 391 PANTHER CASEIN KINASE I-LIKE PROTEIN 83 378 - -
Ssu7g2240 391 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Ssu7g2240 391 Gene3D Transferase(Phosphotransferase) domain 1 84 272 - -
Ssu7g2240 391 Gene3D Transferase(Phosphotransferase) domain 1 1 83 - -
Ssu7g2240 391 PANTHER CASEIN KINASE-RELATED 83 378 - -
Ssu7g2240 391 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 39 - -
Ssu7g2240 391 PANTHER CASEIN KINASE-RELATED 1 39 - -
Ssu7g2240 391 MobiDBLite consensus disorder prediction 332 355 - -
Ssu7g2240 391 SUPERFAMILY Protein kinase-like (PK-like) 5 228 IPR011009 -
Ssu7g2240 391 PANTHER CASEIN KINASE-RELATED 40 83 - -
Ssu7g2240 391 PANTHER CASEIN KINASE I-LIKE PROTEIN 40 83 - -
Ssu7g2240 391 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2240 391 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2240 Ssu-Chr7 44187614 44195098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2240 K08960 - gmx:100789031 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1213 4 19237578 19241939 Ssu7g2240 7 44187614 44195098 PCT