Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2237 ATGAAGAGGTCCCTCTCCCATGGTGGTTGCACTCACTCGCAGGCCGCAACAATGGCGGCAGAAGAAGAAGATTCCCGAGGAATCCGCGTCCGTGGCATGCAATTCTCCTACGACGTACAACAACCGCCGCTCTTCCTCGACTTCAACCTCAACGTCTCTCCCGGATCGCGGTGCCTCCTCGTCGGCGCCAACGGATCCGGGAAAACGACTTTGCTGAAGATTCTGGCGGGGAAGCACATGGTTGGGGGAAGAGAAGTCGTGCGCGTGTTGAACGGTTCCGCTTTTCATGACACTCAACTCGTTTGTAGCGGGGATCTCGCTTATTTGGGCGGATCCTGGAGCAAAAACGTTGGCTCCGCTGGAGAAATTCCACTCCAAGGAGACTTCTCTGCTGAACATATGATCTTTGGAGTTGAGGGCGCTGATCCTGATAGGAGAGATAGGTTAATTGAGCTGCTTGATATCGATCTGCAGTGGCGAATGCATAAGGTATCCGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTCGGTCTTCTTCATCCATTTAAGGTTCTCTTGCTGGACGAGGTTACTGTTGATCTGGATGTTGTTACTCGGATGGATTTATTGGACTTCTTTAGGGAAGAATGTGAACAGAGAGAAGCTACAATCGTATATGCAACTCATATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATACATACAAGATGGTGAACTGAGAAGAGCAGAAAAAATATCAGATGTTAACGAGTTGAAGTCTTCAACTAATCTGCTGTCTGTTGTTGAGGCCTGGCTCCGTGCTGAAACAAAGCTTGATAAGAAGAACCCTGTCCATAATACTTCCCACGTCCAAAAGACTTCTTTTGCTAGTTCTCCATTCTTTTCGTCTAGACACATGGCGTACTATCGATAG 921 0.4864 MKRSLSHGGCTHSQAATMAAEEEDSRGIRVRGMQFSYDVQQPPLFLDFNLNVSPGSRCLLVGANGSGKTTLLKILAGKHMVGGREVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPDRRDRLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPFKVLLLDEVTVDLDVVTRMDLLDFFREECEQREATIVYATHIFDGLETWATHLAYIQDGELRRAEKISDVNELKSSTNLLSVVEAWLRAETKLDKKNPVHNTSHVQKTSFASSPFFSSRHMAYYR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2237 306 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 25 306 - -
Ssu7g2237 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 253 IPR027417 -
Ssu7g2237 306 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 25 306 - -
Ssu7g2237 306 SMART AAA_5 54 241 IPR003593 -
Ssu7g2237 306 MobiDBLite consensus disorder prediction 1 23 - -
Ssu7g2237 306 Pfam ABC transporter 47 191 IPR003439 GO:0005524
Ssu7g2237 306 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 264 IPR003439 GO:0005524
Ssu7g2237 306 Gene3D - 25 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2237 Ssu-Chr7 44115008 44117897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2237 28 256 Calmodulin-binding Proteins AT2G36910 22.541 1.27e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2237 K12608 - gmx:100788503 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2237 7 44115008 44117897 Ssu7g2237 7 44115008 44117897 ECH