Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2227 ATGTTTATTAGCATCCATTTAGAGACGGTAGTGCTTCTTCTGCTGCGTTCTGTTCTGGACACAACACAACAGTGTCTGCACCCTGCAATGGTTTCGCTATCAACATGGTTTCGCTACATTGCCCACAAGCTTGAATACTCCGTCTCCCTCAGCTGGAAGAATTATAAAGGAGGTCAAATTACAGACAGAGAGGTAGGTGATGTTGTTTGGAAAAACTTCTTTCAAGGAAAGCTGACGTACTTTCACTGGAATAAAGGAGAGGAGATGACCCCTACTATTGATGGAAAAGCAGTAACTCTTGTTCGGAAATTACCAACTGCAGACCCAACGCGTGTTTTTGTAGGAGATGTTGTGGTTTTGAAGGACCCTGAGAAGCCAAATAACTACCTAGTCAGAAGATTAACTGCAATTGAAGGTTATGAAATGGTTTCTACTGATGAAAAGGATGAATCCTTTATTCTCGAGAAGGATCAGTGCTGGGTAGTGgctgaaaatgaaaaattgaaagccAAGGAAGCGAACGATAGCCGAACATTTGGTCCAGTTCAGATGACAGACATTGTAGGCAGAGTCATTTATTACCTGCAAAGTGCTGTAGACCATGGCCGTGTACAGAACAGTCATTTCAGCATGCGAAAGGATACACCAGTGTTGGAAGTGGAACTTGATGTTGATGAGATGGCCAAGAGTCACAAAGCCTGA 702 0.4188 MFISIHLETVVLLLLRSVLDTTQQCLHPAMVSLSTWFRYIAHKLEYSVSLSWKNYKGGQITDREVGDVVWKNFFQGKLTYFHWNKGEEMTPTIDGKAVTLVRKLPTADPTRVFVGDVVVLKDPEKPNNYLVRRLTAIEGYEMVSTDEKDESFILEKDQCWVVAENEKLKAKEANDSRTFGPVQMTDIVGRVIYYLQSAVDHGRVQNSHFSMRKDTPVLEVELDVDEMAKSHKA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2227 233 PANTHER OSJNBA0068L06.9 PROTEIN 30 233 - -
Ssu7g2227 233 SUPERFAMILY LexA/Signal peptidase 85 204 IPR036286 -
Ssu7g2227 233 CDD S26_SPase_I 85 191 IPR019533 GO:0004252|GO:0006465
Ssu7g2227 233 Gene3D Umud Fragment, subunit A 77 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2227 Ssu-Chr7 43908937 43919896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2227 89 202 MADS-box Gene Family AT1G29960 28.571 5.99e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2227 - - gmx:100500100 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2227 7 43908937 43919896 Ssu7g2227 7 43908937 43919896 ECH