Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2219 ATGGCGAAGGAGCAAGTTCAGGTGCTAAATGCCCTGGACGTGGCAAAGACACAATGGTACCATTTCACTGCAATCATCATCGCTGGAATGGGCTTCTTCACTGATGCCTATGATCTGTTTTGCATATCACTTGTGACAAAGCTACTTGGGCGCATATACTATCACGTTGACGGGGCAGCAAAGCCTGGCACATTGCCTCCCAATGTGTCAGCTGCCGTTAACGGTGTAGCTTTCGTTGGAACGCTCTCTGGGCAACTCTTCTTTGGCTGGCTCGGCGACAAAATGGGCCGAAAAAAGGTGTATGGCATGACTCTCATGCTCATGGTCATAGCCTCCATTGCTTCGGGTCTTTCCTTCGGACGTGATCCGAAGACTGTGATGACAACTCTCTGCTTCTTCCGCTTCTGGCTTGGCTTTGGTATTGGCGGAGACTACCCACTTTCAGCCACCATAATGTCTGAGTATGCTAATAAGAAGACTCGTGGCGCCTTTATAGCTGCAGTGTTTGCCATGCAGGGCTTTGGAATTTTGGCAGGAGGTGTGTTTGCAATCATAATAGCATCTGCATTCAAGGCGAAGTTTGATGCTCCACCATATGAGGTTGATCCATTGGGTTCGACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTAATGGTGGGAGCACTTCCTGCTGCATTGACTTACTATTGGAGATTAAAGATGCCAGAAACTGCGCGCTACACTGCGCTAGTTGCCAAGAATGCGGAGCAGGCTGCAGCAGATATGTCTAAGGTTATGCAAATGGAGATTCAAGCTGAGCCAAAAAAGGAGGAGCCACAAGCTAAATCATATGGATTGTTCTCCAAGGAGTTCTTGAGTCGCCATGGACTGCATCTGCTTGGAACAACTAGCACGTGGTTCTTGCTTGACATTGCATTCTATAGCCAAAATCTGTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATTCCTCCAGCAAAAACCATGAGTGCTCTTGAGGAGGTTTTCAAAATTGCACGGGCTCAAACTCTTATTGCCCTCTGCAGCACAGTTCCAGGGTACTGGTTTACTGTGGCCTTCATTGACAAGATAGGAAGATTTACTATCCAGTTGATGGGATTCTTCTTTATGACCATCTTCATGTTTGCTCTTGCCATTCCCTATGACCACTGGACTCTTAAGGAGAACAGAATAGGATTTGTGGGCATTTATTCTCTCACCTTCTTCTTTGCAAACTTTGGGCCTAATGCCACCACATTTGTTGTGCCAGCGGAGATTTTCCCAGCTAGATTTAGGTCTACTTGCCATGGAATATCTTCAGCATCCGGGAAGCTTGGGGCTATGGTTGGTGCATTCGGGTTTTTGTATTTGGCACAGAGCCAGGACAAGAGCAAAACAGATGCAGGGTACCCTGCAGGTATTGGTGTGAGAAATTCATTGCTTGTGTTAGGTGTCGTAAACATATTAGGATTCCTGTTTACTTTCTTGGTGCCTGAAGGAAAGGGTAGATCTCTAGAGGAGATTTCAGGTGAGAATGAAGAGGAAGTTGAAACCAAGGTGTAA 1569 0.464 MAKEQVQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFVGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVIASIASGLSFGRDPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVFAIIIASAFKAKFDAPPYEVDPLGSTVPQADYVWRIILMVGALPAALTYYWRLKMPETARYTALVAKNAEQAAADMSKVMQMEIQAEPKKEEPQAKSYGLFSKEFLSRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMSALEEVFKIARAQTLIALCSTVPGYWFTVAFIDKIGRFTIQLMGFFFMTIFMFALAIPYDHWTLKENRIGFVGIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQSQDKSKTDAGYPAGIGVRNSLLVLGVVNILGFLFTFLVPEGKGRSLEEISGENEEEVETKV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2219 522 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Ssu7g2219 522 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Ssu7g2219 522 CDD MFS_PhT 25 503 - -
Ssu7g2219 522 TIGRFAM 2A0109: phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
Ssu7g2219 522 Gene3D MFS general substrate transporter like domains 20 522 IPR036259 -
Ssu7g2219 522 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 520 - -
Ssu7g2219 522 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 520 - -
Ssu7g2219 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2219 Ssu-Chr7 43793700 43795268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2219 1 519 Inorganic Solute Cotransporters AT3G54700 85.164 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2219 K08176 - gmx:100786638 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2219 7 43793700 43795268 Ssu7g2219 7 43793700 43795268 ECH
Ssu7g2219 7 43793700 43795268 Ssu4g1234 4 19640806 19642428 PCT