Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2211 ATGTCTAACAATGAAAGTGCATTTGGGGTTATGTATGGGAAATTCAAGCCTCACCTTCTCATGGTTCTAGTTCAGCtggctttttcttttctctatttcctaGTAGAGGCTTCATTAAACAAAGGGATGAACCCTCATGTCTTTGTTACTTATCGGCATGCTGTTGGGGGCATAGTTGTGCTTCCTTTTGCTTACGTTAGTGAAAGAAAAGCATGGCCAAAGTTGACTATGACGATGTTCATGGagctattttttctttccctcttcGGGATCAGTCTTACCCTGAACATGTTTTTCGCAAGTTTGAAAGATACGACTCCTTCCTTTGTTGCATCCATGATTAACACAATCTCATCCCTCACTTTTATAGTTGCAGTTGGACTCAGGCTAGAGGTTGTTGATGTTAAGAAGCCTCGTGGACTGGCTAAAGTTTTTGGAACTGTATTATCTTTGATTGGTGCCTTGATAATGACTTTGTATAAGGGGCACACGATACAAAGCTTACAGAGTGCCCCGTTCCATATCAGAGGCAATTTGGTTCATAATGACTGGATTAAAGGATCAATTTTGTGTGTTGCAAGTTGCATATCATGGTCTTTATGGTACATACTACAGGCAATCATAGTGAAGAAATATCCAGTACAACTGTCACTAACAGCATGGATAAATTGCATGGGTGCAGCACAGTCTGCTGCCTTTACTGTACTCGTGCAAGACAAACTTACAACATGGTTCATTACATCCACTGTTGAACTCTGTTGCATTTTATATGCAGGAGTTATATGTGGTggttttattatattcagtcaATTCTGGACCACGGAACAAAAAGGGCCAGTCTTTGTGAGCATGTTTAATCCCCTGGGAACAATTTTGGTGGCAATCCTagcatattttgtttttggggAACAACTCCACACTGGCAGTTTATTGGGAGTAGTCATTGTTATCATTGGTCTATACATGCTATTATGGGGAAAAGAAAGTGATCGAGATTACAAGTCACAGCAATCGTTTCCAACACATGTTGAGCAGGAAGAATGTAGAACACAGATAAAGACTTCAGCTGAGCAAGAGCTACCGCAGAGGAACGTATTACAGGACACCATTAACGGATATATGGCCCAATTATGA 1134 0.3801 MSNNESAFGVMYGKFKPHLLMVLVQLAFSFLYFLVEASLNKGMNPHVFVTYRHAVGGIVVLPFAYVSERKAWPKLTMTMFMELFFLSLFGISLTLNMFFASLKDTTPSFVASMINTISSLTFIVAVGLRLEVVDVKKPRGLAKVFGTVLSLIGALIMTLYKGHTIQSLQSAPFHIRGNLVHNDWIKGSILCVASCISWSLWYILQAIIVKKYPVQLSLTAWINCMGAAQSAAFTVLVQDKLTTWFITSTVELCCILYAGVICGGFIIFSQFWTTEQKGPVFVSMFNPLGTILVAILAYFVFGEQLHTGSLLGVVIVIIGLYMLLWGKESDRDYKSQQSFPTHVEQEECRTQIKTSAEQELPQRNVLQDTINGYMAQL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2211 377 PANTHER WAT1-RELATED PROTEIN 11 356 IPR030184 GO:0016021|GO:0022857
Ssu7g2211 377 PANTHER WAT1-RELATED PROTEIN 11 356 - -
Ssu7g2211 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
Ssu7g2211 377 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Ssu7g2211 377 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020|GO:0016021
Ssu7g2211 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2211 Ssu-Chr7 43415107 43417395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2211 9 358 Nodulin-like Gene Family AT3G18200 35.211 7.31e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2211 - - gmx:100808275 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2211 7 43415107 43417395 Ssu7g2211 7 43415107 43417395 ECH