Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2200 ATGAAGAGGGAAGCAGCTGCGGTCAGAATTCAAAAGTATATGCGTGGAACACTAGCCAGGAAATGGTACACCGAAATAAAGATCTCTGCCATTGTCTTGCAGACAGGTTTTCGAGCAATGGTTGCTTGTaataaatttagatatagaaAGCAAACTAGTGCATCAACTACTATTCAGTCCTATTGGCGCCGACATAAAGCTCTCGTTGACTATCAGAACCTTAAGAAAGCGTCAATCATTTCACAAAACATCAATCACTCCAGTGATAAACATGAACAGAagTTTTTGGTGACACCTGTGCAAAATGAAAGTCCTTCTATGGAAGAATCTTCAAATCCTGACCAAGAAGAATCCTTAAGTCCTTTCCAAGATGATGAAAGCATTGAAGCTATCAGGGATTCCTCTAGTCCTCTCAAAGACATTGAAAAGATTGAGGTTCTTACTGTGGAAATAAAAAACTTGAAGGTCATGTTGCAGGCAGAAAAACAAAGAGGCGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCTAGCGAAGAGTTACGCAAAAAGTTAGCAGAAACTGAAAAAAGAGTATATCAGCTTCAGGACTCATTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGATGATCTTGAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGGGTTGATGTTGCTTCCAGTAATTCTGATACTTCATCTACAGACTCTGATTTCACATTTCCAGCTCCTGTTTCAAATCCGGAACCTTTTTCTTCCCCAGAGTCAAATTCTTTCCCCCTAGTAGTTCAGGATGTCACTGCAGAGGATGAATCGGGATCTGAAAGTGAAAAGGAGGGTTCATTTGATGATTTCTTCTAG 894 0.3926 MKREAAAVRIQKYMRGTLARKWYTEIKISAIVLQTGFRAMVACNKFRYRKQTSASTTIQSYWRRHKALVDYQNLKKASIISQNINHSSDKHEQKFLVTPVQNESPSMEESSNPDQEESLSPFQDDESIEAIRDSSSPLKDIEKIEVLTVEIKNLKVMLQAEKQRGDEYERKYVEAQGSSEELRKKLAETEKRVYQLQDSLNRMISSMSSQVAELKMILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPAPVSNPEPFSSPESNSFPLVVQDVTAEDESGSESEKEGSFDDFF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2200 297 MobiDBLite consensus disorder prediction 237 253 - -
Ssu7g2200 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 81 IPR027417 -
Ssu7g2200 297 MobiDBLite consensus disorder prediction 237 297 - -
Ssu7g2200 297 PANTHER MYOSIN 1 121 - -
Ssu7g2200 297 Coils Coil 144 199 - -
Ssu7g2200 297 MobiDBLite consensus disorder prediction 100 134 - -
Ssu7g2200 297 Gene3D - 2 55 - -
Ssu7g2200 297 SMART iq_5 25 47 IPR000048 GO:0005515
Ssu7g2200 297 SMART iq_5 2 24 IPR000048 GO:0005515
Ssu7g2200 297 SMART iq_5 50 72 IPR000048 GO:0005515
Ssu7g2200 297 ProSiteProfiles IQ motif profile. 51 78 IPR000048 GO:0005515
Ssu7g2200 297 PANTHER MYOSIN 145 235 - -
Ssu7g2200 297 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 1 121 - -
Ssu7g2200 297 Pfam IQ calmodulin-binding motif 53 68 IPR000048 GO:0005515
Ssu7g2200 297 Pfam IQ calmodulin-binding motif 5 23 IPR000048 GO:0005515
Ssu7g2200 297 ProSiteProfiles IQ motif profile. 3 27 IPR000048 GO:0005515
Ssu7g2200 297 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 145 235 - -
Ssu7g2200 297 MobiDBLite consensus disorder prediction 282 297 - -
Ssu7g2200 297 MobiDBLite consensus disorder prediction 100 118 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2200 1 82 Myosins gene family AT3G58160 46.341 4.67e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2200 K10357 - gmx:100803485 457.218