Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu7g2186 | ATGGAAGATGTTGAGCAAGCTAATAGAGCAGCTGTTGAAAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAGCCCAGGGATCAGGTTCAGCAAAGGAATTTACTGGTGGAAACTGGGGAAGCTGTGGCGAGGTTCAATAAGGTTGTTTCCTTGCTTCACAATGGTTTGGGTCATGCAAGAGTGAGGAAGGTTAAAAACCCTCAGGTCTCCTCTTCCCACCAAAGTATTTTCTTGGACAACCCCAATTGCAAAACCAACCATCACCCAAAAAGTCTGCAGTTTCCCCAAATGAGCTTTCCTGACAATTCAATTCAGGAACTGGGTTCAACCATAAAAAAATCACTCTCTCTTGGACAACCATCTTTGGAATTGAGCTCTAGTGGGAAGAATCCTCTTCACCTCACACAACAGGCTTCATCAGCTCACTATCACTTCTTTCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAAAGGTTGTTGCTGCAGCAGAAGCAGCAGCAGCAATTGAAGCATCAGGCAGAAATGATGTTCCGAAGGAACAACAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACGCCAACAATGTCATCTACTAGGTCGTTTATTTCTTCCTTGAGCATAGATGGAAGTGTAGCTAACTTGGATGGAAGTGCCTTCCATTTGATGGGAGCTCCACACTCTTCTGATCAGAACTCACAACAGCATAAGAGAAAATGTTCTGCCAGAGGTGATGAGGGAAGTTTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCTAAGAAGAGGAAACATAGAGTGAAGAGGTCCATTAAGGTGCCTGCTATCAGTAACAAACTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGgGGATATTATAAGTGCAGCAGCATGAGAGGGTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATTGTTACCTATGAAGGCGAACATAACCACCCTAAGTTACCAACACAGTCTGCAAATGCATGA | 1065 | 0.4516 | MEDVEQANRAAVESCHRVLSLLSQPRDQVQQRNLLVETGEAVARFNKVVSLLHNGLGHARVRKVKNPQVSSSHQSIFLDNPNCKTNHHPKSLQFPQMSFPDNSIQELGSTIKKSLSLGQPSLELSSSGKNPLHLTQQASSAHYHFFQQQQQQQQQQQQRLLLQQKQQQQLKHQAEMMFRRNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSVANLDGSAFHLMGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSSRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu7g2186 | 354 | ProSiteProfiles | WRKY domain profile. | 281 | 347 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2186 | 354 | MobiDBLite | consensus disorder prediction | 227 | 249 | - | - | |
Ssu7g2186 | 354 | SMART | WRKY_cls | 286 | 346 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2186 | 354 | Pfam | Plant zinc cluster domain | 239 | 284 | IPR018872 | - | |
Ssu7g2186 | 354 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 353 | IPR044810 | GO:0003700 | |
Ssu7g2186 | 354 | Gene3D | WRKY domain | 270 | 348 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2186 | 354 | SUPERFAMILY | WRKY DNA-binding domain | 284 | 346 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2186 | 354 | Pfam | WRKY DNA -binding domain | 288 | 345 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2186 | 354 | PANTHER | WRKY DNA-BINDING PROTEIN 21-RELATED | 2 | 353 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu7g2186 | Ssu-Chr7 | 42853483 | 42855303 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu7g2186 | 1 | 351 | WRKY Transcription Factor Family | AT2G30590 | 58.684 | 3.75e-126 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Ssu7g2186 | WRKY | 5e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu7g2186 | - | - | gmx:100170681 | 594.734 |