Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2186 ATGGAAGATGTTGAGCAAGCTAATAGAGCAGCTGTTGAAAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAGCCCAGGGATCAGGTTCAGCAAAGGAATTTACTGGTGGAAACTGGGGAAGCTGTGGCGAGGTTCAATAAGGTTGTTTCCTTGCTTCACAATGGTTTGGGTCATGCAAGAGTGAGGAAGGTTAAAAACCCTCAGGTCTCCTCTTCCCACCAAAGTATTTTCTTGGACAACCCCAATTGCAAAACCAACCATCACCCAAAAAGTCTGCAGTTTCCCCAAATGAGCTTTCCTGACAATTCAATTCAGGAACTGGGTTCAACCATAAAAAAATCACTCTCTCTTGGACAACCATCTTTGGAATTGAGCTCTAGTGGGAAGAATCCTCTTCACCTCACACAACAGGCTTCATCAGCTCACTATCACTTCTTTCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAAAGGTTGTTGCTGCAGCAGAAGCAGCAGCAGCAATTGAAGCATCAGGCAGAAATGATGTTCCGAAGGAACAACAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACGCCAACAATGTCATCTACTAGGTCGTTTATTTCTTCCTTGAGCATAGATGGAAGTGTAGCTAACTTGGATGGAAGTGCCTTCCATTTGATGGGAGCTCCACACTCTTCTGATCAGAACTCACAACAGCATAAGAGAAAATGTTCTGCCAGAGGTGATGAGGGAAGTTTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCTAAGAAGAGGAAACATAGAGTGAAGAGGTCCATTAAGGTGCCTGCTATCAGTAACAAACTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGgGGATATTATAAGTGCAGCAGCATGAGAGGGTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATTGTTACCTATGAAGGCGAACATAACCACCCTAAGTTACCAACACAGTCTGCAAATGCATGA 1065 0.4516 MEDVEQANRAAVESCHRVLSLLSQPRDQVQQRNLLVETGEAVARFNKVVSLLHNGLGHARVRKVKNPQVSSSHQSIFLDNPNCKTNHHPKSLQFPQMSFPDNSIQELGSTIKKSLSLGQPSLELSSSGKNPLHLTQQASSAHYHFFQQQQQQQQQQQQRLLLQQKQQQQLKHQAEMMFRRNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSVANLDGSAFHLMGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSSRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2186 354 ProSiteProfiles WRKY domain profile. 281 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ssu7g2186 354 MobiDBLite consensus disorder prediction 227 249 - -
Ssu7g2186 354 SMART WRKY_cls 286 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ssu7g2186 354 Pfam Plant zinc cluster domain 239 284 IPR018872 -
Ssu7g2186 354 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 353 IPR044810 GO:0003700
Ssu7g2186 354 Gene3D WRKY domain 270 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ssu7g2186 354 SUPERFAMILY WRKY DNA-binding domain 284 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ssu7g2186 354 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ssu7g2186 354 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2186 Ssu-Chr7 42853483 42855303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2186 1 351 WRKY Transcription Factor Family AT2G30590 58.684 3.75e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ssu7g2186 WRKY 5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2186 - - gmx:100170681 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2186 7 42853483 42855303 Ssu7g2186 7 42853483 42855303 ECH