Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2159 ATGTTGAACAAAATGAATTACCTACCATCAAACCTGTTGCCTGATGAAGGAAGCCCAGAGTGGATGAACAAGGGGGACAACACGTGGCAACTGACGACAGCTACTTTGGTGGGCCTGCAAAGTGTTCCGGGCCTGGTCATCCTCTACGGCAGCATAGTGAAGAAGAAATGGGCTTTGAACTCTGCATTCATGGCCCTGTACGCATTCGCGGCGGTTCTGGTTTGTTGGGTGGGGTGGTGCTACCAAATGTCATTCGGCGAGGGGATCCTTCCATTCCTGGGACGGCCGAACGTGGCCTTGGACCAGAAATTCCTTCTGCGCCAAGCTTTTGCAGGGAACTTTCCCAACGCCTCCATGGTGTACTTCCAGTTGGTTTTTGCTGCCATCACGTTGATTCTCATAGCAGGGGCGTTGCTCGGGAGAATGAACTTCCACGCCTGGATGTTGTTTGTTCCACTCTGGCTCACATTCTCCTACACCATTTGTGCCTTCAGTATATGGAGCACTGGTGGATGGTTATTCAAGATGGGCCTGATTGATTATTCCGGTGGCTTTGTTATTCACCTTTCTTCTGGGGTTGCTGGTTTCACCGCAGCATGTTGGGTGGGACCAAGGGCAATGAAGGATAGAGAGAGATTTCCTCCAAACAACATACTTCTAATGCTGGCTGGGGCTGGCCTACTATGGATGGGATGGACTGGATTCAACGGTGGAGATCCATACACAGCCAGCATAGATGCATCTCTCGCCATCCTTAACACCCACGTGTGCACGGCCATGAGCTTGTTGACTTGGCTTTCCCTTGACATCCTCTTCTTTGGAAAACCTTCGGTCATTGGTGCCACTCAAGGCATGATCACTGGTCTGGTTTGCATCACCCCTGCTGCAGgTGTGGTGCAAGGTTGGGCAGCAATCATAATGGGAGTGATGTCTGGAAGCATCCCATGGTACACAATGATGGTCCTGCACAAAGAAATTAGGCTCCTCAAACTGGTGGATGATACTATGGCAGTTTTCCACACCCATGCCGTGGCTGGTTGTTTAGGTGGCATTCTGGCTGGCTTCTTTGCTGACCCTAAGCTTTGTCGTCTCTTCTATCAGGTACAAGATTGGCAGCATTACACGGGCCTTGGTTATGGCATATTCACAGGGAGGGCCAAGGCAGGGTTCAGGCAAATGGGGGTTCAGCTTCTTGGCATTGTGTTTGTGATCCTGCTCAATGTCGTCACAACTACTATCGTGTGTCGGTTGGTTAAGATCATAGTTCCGCTGAGGCTGCACGAAGATGACTTGCAAGTTGGGGATGATGCAGTTCATGGCGAGGTTGCCTACGCATTGTGGGGCGATGGAGAGAAGCTTGAGACTGCCAATGAGGCTTTGACTTTTGAAAAGAATCACGAATGGCCAACTGTGGAGCTAGAAACTTCGAGTGATGCTCAATTGGAATGA 1449 0.5038 MLNKMNYLPSNLLPDEGSPEWMNKGDNTWQLTTATLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVLVCWVGWCYQMSFGEGILPFLGRPNVALDQKFLLRQAFAGNFPNASMVYFQLVFAAITLILIAGALLGRMNFHAWMLFVPLWLTFSYTICAFSIWSTGGWLFKMGLIDYSGGFVIHLSSGVAGFTAACWVGPRAMKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTASIDASLAILNTHVCTAMSLLTWLSLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAIIMGVMSGSIPWYTMMVLHKEIRLLKLVDDTMAVFHTHAVAGCLGGILAGFFADPKLCRLFYQVQDWQHYTGLGYGIFTGRAKAGFRQMGVQLLGIVFVILLNVVTTTIVCRLVKIIVPLRLHEDDLQVGDDAVHGEVAYALWGDGEKLETANEALTFEKNHEWPTVELETSSDAQLE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2159 482 TIGRFAM amt: ammonium transporter 26 444 IPR001905 GO:0008519|GO:0016020|GO:0072488
Ssu7g2159 482 Pfam Ammonium Transporter Family 29 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Ssu7g2159 482 SUPERFAMILY Ammonium transporter 21 426 - -
Ssu7g2159 482 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 8 469 - -
Ssu7g2159 482 PRINTS Rhesus blood group protein signature 123 139 IPR002229 GO:0005887
Ssu7g2159 482 PRINTS Rhesus blood group protein signature 250 272 IPR002229 GO:0005887
Ssu7g2159 482 PRINTS Rhesus blood group protein signature 219 237 IPR002229 GO:0005887
Ssu7g2159 482 Gene3D Ammonium transporter AmtB like domains 13 447 IPR029020 -
Ssu7g2159 482 PANTHER AMMONIUM TRANSPORTER MEP2 8 469 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2159 Ssu-Chr7 42435747 42438274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2159 117 467 Inorganic Solute Cotransporters AT2G38290 59.544 7.19e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2159 K03320 - gmx:112999382 826.624