Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2148 ATGATTCCGAAGACTCCATCACAGTACCTATTATTCGCGTTAGGGTTTCTGCTCTCTGCCACAATCCCCTTCGTTCACGGGGAATCGTCGACGTGCTTGACGGTCTACAAGAACGGCGGTGCTCCGGCGGTGCTCCAATCCCCAAAATGCCCCCGCTGGAAGCTCATCGATTACGATTCCCCTCCCCAAACCACCGCGCGTTGCCAGACCGCCATGCTCCAGGGCCGCAGAAGCTCCCAAGAGGATCGCGCTCTCTGTGTCCTGGATGTTCGCATTCCCTTCCCCGGTGCGAACGGGATCAAGGAGGTAGCGGTCGGGATTGTGGCCGTTTTCGATGGTCATAACGGTGCTGAAGCTAGTGAGACGGCGTCGAAACTCTTGGTGGAGTATTTCGTTCTGCATACTTATTTTCTTCTCGATGCCGCCTTTTCTGTTATTTCGAAGACGTCAACAGAAACATTGCTTCACAAGAGAGATCGTGATCATGTAAACCTACTGCATAGGTGGAAAGAGATTCTAGGTTGGGAATGGCATGAACTGCATTTTGAAAGGTTTCAGAATACATTTTCTCCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCTTTGTTGAGAGCAGTCCATGACATTGATGCTAAATTTTCTGAGGAAGCCTCTAGAAATAATCTTCACTCAGGATCTACAGCAACCATTGTTTTGGTAGCGGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATCTTGTGCTCTGAAAATTTTCAGTCTCCCAGAGAGGCTAAAGACTCATTATTAAAGCTATATAGGCAGAAAGAGCATGAAGGTTCTGTTTCTGTTTGGGATCGTGAAAAGTACAGATTGGCTTCCTCCCATGGTCTTACTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCAGACAGAGATGATGAAAGAAATCGGGTGGAAACAGCTGGCGGTCAAGTTCAAGATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGATGTACTCTTTAAAAGTTATGGTGTTATATCTGCACCGGAAGTGACTGATTGGCAACCTCTGACTGCTAATGATAGCTATTTGGTGACAGCATCTGATGGTGTATTTGAGAAGATAAGTGTGCAGGATGTCTGTGATTTGTTGTGGGAAGTACACTGTTTCAGCAACATGAGATCAGAGTGTACCCCTTCATCTTCCTATTCGTTGGCAGATTTAATTGTTAATACTGCCTTCCAAAAGGGCAGTATGGACAATGTGGCAGCAGTTGTTGTTCCTCTGGTGTCTGCCAAATCTTCTGCAAACCTTCTTAGGAGAAGCTATATTGGAAAGAAGGATGCAGGTTTCCCATTATTTGGTTTGCAGGAAACTGCTTCCAAAAGCTCAGTTAATGACATTGTGTCTGATCTTATGCCCTTGGAGCAACCTCATCTGGTAGATACCAAGTTTAAACGAATATTGGTTGAAGTAAAAGATGGCgattttggatgtttttatttatctgaaaATCTTGATGAACGAGAGGACTCTAAGCAGATTGCCAAAAAATCTGACTGGGAAGACTATTTGTATGAACTACCTCAGCCTCTACCAGAAGCCCTTCATCAACATGCCGCCTCAGGTGGTCCtgtaaatttatacaataaccAAAACTTTTGCTTTGACCTTGGTCCAACTGTTAATGAAGCTGAAGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTCATTTGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCCAGTAATGGGTCTTCCAATTATTCAATGCCTGATTTAAGGTATGTATTGAAGAAGAGTTTTGGACGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATCAAGATAGTAATGCTGCAAAAATGAGCAAGGATGACAAAAATACAAACGGCAGCTCAACTGCTTCTGATTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTGGAGAGGGGTTCCGCTGTTTACTTAAGTGGGCTGAGGGAGAAGTATTTTGGAGAAATTTTCTTAAATGCCTCTACATGCTTTGAAGATCCACTATCAACTGAAAAATCAAACTGTGTCTTGGAAACATCACAATTTGGTCCTGAGAATTCATTTCCAAACAAATTTCGGCTACAAAGAACCACATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAGTCTTTTGAGTCTCAAGCCAATGAAATATGGCTTGTATTTAGTTATGAAGGTGTGTCATTGTCAAAATTTCTATATGCCGTGGAAGATGCATATGGTACTGCTGAGAAAGAAAGACTTGAGCAAGTTAAACATGTTCAGATACTACGTCCATCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGCGGAAATGCGCAACCTTATCTGGCAGCTGTTATTAGCTCTCAAGTCCTGTCATGATCGCAACATCACACACAGAGATATTAAACCTGagaaTATGGTGATATGCTTTGAAGATCAGGAAACAGGGAGATGCTTGAAAGAGATTCCCactaaagttaataatttttccaccAAAATGCGAATTATTGACTTTGGAAGTGGAATTGATGAATTCACATTAAAGCATTTATATGGTTCCACTGGGCCTTCTAGAGCTGAACAAACCTATGAGTATACGCCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAAATGTTTTCCAGATAAATGCTTTGACACGTGCTCTTTTAGACCAGCATCTAGAAGGCTGGAATGAGGGCGTGAAGGAGCTGGCATACAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGGATCTCCAGGTCCAGCAGTTCCTCAAAAAAGTATCACACAGTGAACCAAGTTGGGGTTTCACCTGCATCTTGGAAATGCTCTGAAGAATTCTTTTCCCGTCAAATTAAGAATCGAGATCCCCTAAAAATAGGacTTGCAGTTTTTCAAACATCTGGGCTTTACGGTTAG 3147 0.4166 MIPKTPSQYLLFALGFLLSATIPFVHGESSTCLTVYKNGGAPAVLQSPKCPRWKLIDYDSPPQTTARCQTAMLQGRRSSQEDRALCVLDVRIPFPGANGIKEVAVGIVAVFDGHNGAEASETASKLLVEYFVLHTYFLLDAAFSVISKTSTETLLHKRDRDHVNLLHRWKEILGWEWHELHFERFQNTFSPNFDDSFHLEILKEALLRAVHDIDAKFSEEASRNNLHSGSTATIVLVADDKILVANIGDSKAILCSENFQSPREAKDSLLKLYRQKEHEGSVSVWDREKYRLASSHGLTHFAVKELTSDHHPDRDDERNRVETAGGQVQDWGGVPRINGQLAITRAIGDVLFKSYGVISAPEVTDWQPLTANDSYLVTASDGVFEKISVQDVCDLLWEVHCFSNMRSECTPSSSYSLADLIVNTAFQKGSMDNVAAVVVPLVSAKSSANLLRRSYIGKKDAGFPLFGLQETASKSSVNDIVSDLMPLEQPHLVDTKFKRILVEVKDGDFGCFYLSENLDEREDSKQIAKKSDWEDYLYELPQPLPEALHQHAASGGPVNLYNNQNFCFDLGPTVNEAEDQCINPEGFASFICLLESIPLHDTGSSNGSSNYSMPDLRYVLKKSFGRGSYGEVWLAFHWNCNQDSNAAKMSKDDKNTNGSSTASDCQDGPSNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASTCFEDPLSTEKSNCVLETSQFGPENSFPNKFRLQRTTYEEGLNHIARYVESFESQANEIWLVFSYEGVSLSKFLYAVEDAYGTAEKERLEQVKHVQILRPSKWWHWLKTTEEGQAEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQINALTRALLDQHLEGWNEGVKELAYKLRSFMELCILIPGISRSSSSSKKYHTVNQVGVSPASWKCSEEFFSRQIKNRDPLKIGLAVFQTSGLYG 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2148 1048 SMART PP2C_4 59 439 IPR001932 -
Ssu7g2148 1048 Pfam Protein phosphatase 2C 200 434 IPR001932 -
Ssu7g2148 1048 PANTHER ALPHABET, ISOFORM E-RELATED 21 605 - -
Ssu7g2148 1048 SMART serkin_6 618 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2148 1048 ProSiteProfiles PPM-type phosphatase domain profile. 67 441 IPR001932 -
Ssu7g2148 1048 Gene3D - 63 448 IPR036457 -
Ssu7g2148 1048 CDD PP2Cc 74 441 IPR001932 -
Ssu7g2148 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Ssu7g2148 1048 SUPERFAMILY Protein kinase-like (PK-like) 617 997 IPR011009 -
Ssu7g2148 1048 Pfam Protein kinase domain 818 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2148 1048 Gene3D Transferase(Phosphotransferase) domain 1 809 1035 - -
Ssu7g2148 1048 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 21 605 - -
Ssu7g2148 1048 ProSiteProfiles Protein kinase domain profile. 618 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2148 1048 SUPERFAMILY PP2C-like 65 441 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2148 Ssu-Chr7 42237668 42262688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2148 682 1038 PP2C-type Phosphatase Gene Family AT3G63340 64.067 6.39e-155 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Ssu7g2148 Pkinase 1.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2148 - - gmx:100781476 1953.72