Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2119 atgtcAAGAACAAGAAATCTGAGTTACCTCAACATGTGTTGCTCAAATTCCGCTACTCCTGAATCAGAATCTCCTCCGTTGAGCCCTCTGGCCACTTCCTCACATCACAACACTCAATGTCCATCTCCTTCTTCAATTATGATCAAGAACTTCAACTCTATCTATGACCCTACCTTAACCTCTGACCACTCTTTCTCCTCCACTTTCTTCTCCGCCGCCACCGCCGCCTTCTTTGAACCCGAACCCGAACCCGAACCGGCGGACTTCGCCACCGCCTTCGCCTCCCAacgcttcttcttctcctcaccCGGCCGCTCCAACTCACTCGTCAATAACGCTCAACACTCACCACCGTTGAGAGAAGACGGCGAtgttgagaagaagaagaagaagaaggtgtTGTTCAAGGGGAGCGTGGCGGTGGCGACATACTCGCCGGATCCTTTCGTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCCGAGCTGATGGACGTGAAGTCCAATTGGAACGTCTTGCACGAGCTTCTTCTATGCTACCTCGCGCTCAACCCGAAGAGCACCCACAAGTTTATTCTTGGTGCTTTCGCGGATCTCCTCGTTAGCCTCATGTCTTTCTAG 630 0.4889 MSRTRNLSYLNMCCSNSATPESESPPLSPLATSSHHNTQCPSPSSIMIKNFNSIYDPTLTSDHSFSSTFFSAATAAFFEPEPEPEPADFATAFASQRFFFSSPGRSNSLVNNAQHSPPLREDGDVEKKKKKKVLFKGSVAVATYSPDPFVDFRRSMQEMVEARPELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2119 209 MobiDBLite consensus disorder prediction 17 41 - -
Ssu7g2119 209 ProSiteProfiles OVATE domain profile. 141 205 IPR006458 -
Ssu7g2119 209 PANTHER TRANSCRIPTION REPRESSOR OFP12 4 208 - -
Ssu7g2119 209 Pfam Transcriptional repressor, ovate 145 206 IPR006458 -
Ssu7g2119 209 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 208 IPR038933 GO:0045892
Ssu7g2119 209 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 139 207 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2119 Ssu-Chr7 41828965 41829594 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu7g2119 Ovate 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2119 - - gmx:102663296 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1304 4 21338819 21339466 Ssu7g2119 7 41828965 41829594 PCT