Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu7g2118 | ATGAGAGAGGGGCTGAGATCTCGGACTCGATTGGGGACGGTTTCTGGTGAAAGAGGAGTTGTTCGCAAGGAGAAGATTGGTGTGAAGAATGAGGCTGTTGATTTGGGTGATGAGGTTTTAGAGGCACAGGACTCAACGATTGAGAAGAAGGGTGAAGTTGAACGTGACGTGAAAGGAGAATGTGGTTTCGATTTGAATGTGAGTCCTAGTGGAAATGTTGACTTAGCTGAGAATGGGAGTGGAGGGAGTTGTTTTAGTGGTGGGGGTAGTATTGTAGTAGCTGAAGTAGATAGGAAGGCGAAGAAGGAACAAGGTTCAAAGGATGAAGTGTTGGTTGGTGGTCGAGTGTTGCGCTCAAGGTCAAAGAGGGGGGATGATAGAAGAACGTATGATGGAGAAAATGAGGGTGTCTTTGCTGGGAATAATGGAGAACATAGTGGGTGTGAGAGGGTGAAAGTTAAGAAGGAATGTGAAGAAGCTGATGAATTTTTGGCtgacagttgtgagaatgaaatGGTTAAGGTGCAGAAGGCGGGGAATGGCAGGAGGAAATTGAAACGGAAGCGTGGGAGGCCTCCCAAAATAGAGTTGACGGAGCAAGATCAATCAGTTGATCGGTTGCCACGTAAGCGTGGGAGACCTCCCATGTCCGGCCGACAAAACCATCTCGTGACAGTGGTGGCGcatgatagaaaaagaaaggcaGGGGATCGAAAAGGTAAAGAAGGTTCAACTATGAGAGGTGGTGCTAATGTGAGTGCAATTGATGATACAAATTCAAGGAAGTCTGCTGGGAATGAGTTAGAAAAGAAGGAATTTTCTCCTGTCAAGAAGGATAAATTTAGTAAGGTTTTGGAAACTGACAACAATGAAGTTGTCACTGAGAAAAGTGGAAAGAATAAAGTAAAGCAGTTAGTGAGGGATCAAATAAAGGAATGGCTCTCAGCTGCAGGCTGGACAGTTGACTATAGACCCAGGAGTGGCAGAGAGTACAAGGATGCAGTGTATGTTAGTCTGGATGGACATACACATTGGTCAATCACCTTGGCCTACAAAAGGCTTAAAAAGTGTTATGAAGCTGGTAATGGTGAAGGTAAGGTATATGGGCCAGGCTTCAAATTTACACCAATACCAGAAGAGGATTTCAAAATACTTACTAAGGTAATTAACAAGCAAAGAAACAGGAAAGATAAGTTGGTACAGAAAGGGGGAACGGGTGGAAAGAAAGTTGACGGAGTCATTggtaaaaagaacaaagaaaagtCAGGTTCTGATGCAGGCATGGGTAAGTCAATGAAgaggaaaatgaaaaggaaatggTCACTTGGCAACACTGACGTTACATCACCCAACAGGATGCCAGTTCTTGTGAGGGATCGTAAGCGACACAAAACACAAAACAATAAGCGATGTGCTCTGTTGGTTCGCAATGCTGAGGAGATAGATGCAGAAACTGATGGATATGTACTGTACAGCGGAAAACGAACTTTGCTTGCCTGGATGATTGATTTGGGCACAGTCCTTCAAAATGGGAAGGTTCATTATATGCCGCACAAAAGTAAAAGTGCAGCACTGGATGATTCATGGAATAAACAAGATGAATCTGAACGTAAAGGTTCTCATTTTGTTGATGTTGCGGGTGAAGATCCAAATGATGATACATGTGGTGTCTGTGGAGATGGTGGAGACCTAATATGTTGTGATGGTTGCCCATCAACATTTCATCAAGGCTGCTTGGATATAAAAAAGTTTCCATCTGGTGACTGGCACTGCATTTATTGCTGTTGCAAATTTTGTGGGTCAGTTAGTAAAAGTTCAAACCAAGGGGATGGCAATGATCAACTTACTGTATCAAAATTACTCACATGCCAATTATGTGAGGAAAAATaTCACAGATCCTGTGTTGAGGCAAATGATGCAAATACTGATGATTCCAGGGATCCCTTTTGTGGAAACAGATGTCAAGAGTTATCTGAGAGACTTGAAATGCTCCTAGGGGTTAAACATGAAATTGAAGATGGTTATTCTTGGACTTTTATTCGACGGTCAGATGTTGGCTTTGATGCTTCTCAGATAAAACCTCAGATGGTTGAATGTAATTCTAAGCTGGCTGTTGCAGTATCAATAATGGATGAGTGCTTCATGCCATATATTGATCATAAAAGTGGGATCAATCTGATCCACAGTATTCTGTATAATTGTCGGTCAAATTTCAATCGTCTGAACTATAGTGGATTTGTTACTGCAATTCTAGAAAGAGGTGATGAGATCATCGCTGCTGCATGTATCAGGATCCACGGGAACCAACTAGCAGAGATGCCATTTATTGGGACCCGCTATATGTACAGGCGACAAGGAATGTGCCGCCGGCTTCTAAATGCCATTGAACGGGCACTCAGCTCTTTAAATGTTGACTTACTGGTCATACCAGCCATCTCAGAACTCCGAGAAACTTGGACTTCTGTTTTTGGGTTTGAGCCACTTGGATTAACAAGCAAgcaagtaataaataatatgaatctGTTGGTATTCCCTCATGTAGATATGTTACAGAAGAAGATATCAAAACATAAATTGGCTGGTCAAAATCTGATTCCTACAGGAGTTTCCAATCTTAAAAGGAATCAAATAGCAAATAATTCGGATGGAGTGGTCTCATCTGGATCTGATTTGATTAATTATACTGAGATTCCTCCCTCTAATGCATGCCAGATAAATGATGAAACCATATCTATTGAATCTGGTTGTCATCTTCCTGAGGGTTCATTGAATAATGTACCTGACATTGCTAGCAACACTATAGATCATAGGAAATCTTCAAAAGATGACACATGTCAAGTTGTATGTCAAGTGGTTCATGAAAATTTGGTGAGTGAAGACAACAGTATTGAAAATGCCCGTGATTATGTGACTGATACTTGTTGCCGAGTTGAAGATAACCAGTTGAACAATTGCTGCATTCCTTATGAGGAGAGGCAGTGTCTCACGTCTTGTGTTAGCACTGAGGCTACAGGATATTGTGTTGGTGTTTCACTGGAGGTTACTGAAAACTTTCCCAATCAGGTCAAAGTAGCGAATGAggttatttcaaataaaaacagTGCTGATAACTCTGCACCCTGTGGTGCAGAAAGTATTCCTCTTGACTCACAAATTGCATTTGGTACAAGGGATTCAACAGATTCTGCTGACTGTATTCACCAGGATTCATATAAGATTTCTGACAGTTGTGGACTGAGAAGCAAGACTGATTGTGGTCAACCGaattttataggaacaaaagaAGTACACGCTGAATCTGGTAGTGTTTGTGGTTTTCACTCTAGACCCAAGGGTGATTGTGCTTCTGGTGAAGCTGCTCCCACAACCAACGTCTTGATGCACCTTAGATCACAGAACATAGCCAATAATAAGCCTTGGATCAAAGGGTCTTCAGAGCTAGCTGAGCCTGATTTGCAGGTTGGTCAAACCGCACAGAACAGTGCTCCCTCCTTGTGGAGCTCAAACACTGCTTCTGGTGCAGCTCTTCACTGGGCATCTGGTGGCAGTGCTTCACGTGGTAGTACTGAGGGGATAGTTTTGTCAAACCAAGCCAGTTGA | 3600 | 0.4111 | MREGLRSRTRLGTVSGERGVVRKEKIGVKNEAVDLGDEVLEAQDSTIEKKGEVERDVKGECGFDLNVSPSGNVDLAENGSGGSCFSGGGSIVVAEVDRKAKKEQGSKDEVLVGGRVLRSRSKRGDDRRTYDGENEGVFAGNNGEHSGCERVKVKKECEEADEFLADSCENEMVKVQKAGNGRRKLKRKRGRPPKIELTEQDQSVDRLPRKRGRPPMSGRQNHLVTVVAHDRKRKAGDRKGKEGSTMRGGANVSAIDDTNSRKSAGNELEKKEFSPVKKDKFSKVLETDNNEVVTEKSGKNKVKQLVRDQIKEWLSAAGWTVDYRPRSGREYKDAVYVSLDGHTHWSITLAYKRLKKCYEAGNGEGKVYGPGFKFTPIPEEDFKILTKVINKQRNRKDKLVQKGGTGGKKVDGVIGKKNKEKSGSDAGMGKSMKRKMKRKWSLGNTDVTSPNRMPVLVRDRKRHKTQNNKRCALLVRNAEEIDAETDGYVLYSGKRTLLAWMIDLGTVLQNGKVHYMPHKSKSAALDDSWNKQDESERKGSHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQGCLDIKKFPSGDWHCIYCCCKFCGSVSKSSNQGDGNDQLTVSKLLTCQLCEEKYHRSCVEANDANTDDSRDPFCGNRCQELSERLEMLLGVKHEIEDGYSWTFIRRSDVGFDASQIKPQMVECNSKLAVAVSIMDECFMPYIDHKSGINLIHSILYNCRSNFNRLNYSGFVTAILERGDEIIAAACIRIHGNQLAEMPFIGTRYMYRRQGMCRRLLNAIERALSSLNVDLLVIPAISELRETWTSVFGFEPLGLTSKQVINNMNLLVFPHVDMLQKKISKHKLAGQNLIPTGVSNLKRNQIANNSDGVVSSGSDLINYTEIPPSNACQINDETISIESGCHLPEGSLNNVPDIASNTIDHRKSSKDDTCQVVCQVVHENLVSEDNSIENARDYVTDTCCRVEDNQLNNCCIPYEERQCLTSCVSTEATGYCVGVSLEVTENFPNQVKVANEVISNKNSADNSAPCGAESIPLDSQIAFGTRDSTDSADCIHQDSYKISDSCGLRSKTDCGQPNFIGTKEVHAESGSVCGFHSRPKGDCASGEAAPTTNVLMHLRSQNIANNKPWIKGSSELAEPDLQVGQTAQNSAPSLWSSNTASGAALHWASGGSASRGSTEGIVLSNQAS | 1199 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu7g2118 | 1199 | MobiDBLite | consensus disorder prediction | 1178 | 1199 | - | - | |
| Ssu7g2118 | 1199 | MobiDBLite | consensus disorder prediction | 118 | 145 | - | - | |
| Ssu7g2118 | 1199 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 742 | 836 | IPR016181 | - | |
| Ssu7g2118 | 1199 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 694 | 854 | IPR000182 | GO:0016407 | |
| Ssu7g2118 | 1199 | SUPERFAMILY | FYVE/PHD zinc finger | 543 | 596 | IPR011011 | - | |
| Ssu7g2118 | 1199 | MobiDBLite | consensus disorder prediction | 118 | 133 | - | - | |
| Ssu7g2118 | 1199 | MobiDBLite | consensus disorder prediction | 192 | 212 | - | - | |
| Ssu7g2118 | 1199 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 544 | 616 | IPR013083 | - | |
| Ssu7g2118 | 1199 | ProSiteProfiles | Zinc finger PHD-type profile. | 552 | 597 | IPR019787 | - | |
| Ssu7g2118 | 1199 | PANTHER | FINGER PROTEIN, PUTATIVE-RELATED | 525 | 1147 | - | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes