Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2082 ATGGCAGGATTGGAACTCATACCCATAGTAACTAACCAAGTCTTGAAAACTACTTATGCAGCATCTGATGTTCTTATTGGTAAAGAAAGTTTCAAGGCCATTTCAAAACATCTATTTGATATTGAGCCAGTGCTAAAGGAATTACAGCTTCAAGAATTGAATGACTCTCAAGCAGCAAGGGTTGCTCTGGAGTCTCTTGAAGCAGATGTTAAGAAGGCAAGGTTTGGACAGAAGAGTTTCCAAACCATTGGTGGTGGATTGAAGAGTTGGTCAGTGACGTACACATGGGAAGGCACTCTTGCTGCTACAAACAGAAGTTACGAAAAGGTCTCTGGTTTGCAGAGGTGTGGGAAGAGCTACAGGTTGAGGCAGATAAATTACTTGAGGCCTGATTTCAAGAGAGAAGCATTCTCCCAACATGAAGAGAACATGATTATTGAACTCCATGTGAATAATGTTCAAGTTCATGGAGAGGGAAACTGGGGAGACCTTCCCCAAAGAGCTGgaaagaattttAGAATTCTCTTCTTAGACACGCTCTCGCTTCGGCGTTCACGCTTTTGCTTTGGTTTCAAACACGCTCTCGagctctcattctcacaacctCTGGTTCAGCTCTCTCGCAATCTGGAGCTCTCTCTAGTTCGTCTCTCTCGCAATCTCAAGCTCTTTCTGGGGCAATATTcatgggtggcaaaatatgtGCTAGCTGGGCAGAGTTTGGTTGGGTTTGATCTGTTTCCATTTTACTATGACTTCACTGgtgttcttttaaattttcaattgatgagaaaagaaaaagaaaaattgcccTGA 816 0.3848 MAGLELIPIVTNQVLKTTYAASDVLIGKESFKAISKHLFDIEPVLKELQLQELNDSQAARVALESLEADVKKARFGQKSFQTIGGGLKSWSVTYTWEGTLAATNRSYEKVSGLQRCGKSYRLRQINYLRPDFKREAFSQHEENMIIELHVNNVQVHGEGNWGDLPQRAGKNFRILFLDTLSLRRSRFCFGFKHALELSFSQPLVQLSRNLELSLVRLSRNLKLFLGQYSWVAKYVLAGQSLVGFDLFPFYYDFTGVLLNFQLMRKEKEKLP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2082 271 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 74 - -
Ssu7g2082 271 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2082 Ssu-Chr7 41204108 41210409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2082 106 150 MYB Transcription Factor Family AT4G01680 75.556 1.65e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2082 - - gmx:100783638 124.405