Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2058 ATGACTGGAAGTAATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTGCTTATATCCAATTTCAAGCTGTCTTACAATCTGCTAAGACGTGCTGATGGAACGTTCAATCGAGAGTTGGCGGAATTCCTCGACCGCAAGGTCCCGGCTAATACAATTCCCGTTGATGGGGTATTCTCTTTTGATCATGTTGATCGGAACACGGGCCTCTTCAATCGGGTGTATCAACTAGCTCCTGAAAACCGGGCTCGGTGCAGCATAATAGAGCTGGAGAAGCCCCTGAGCACCACAGAGATTGTTCCTGTCATAATTTTCTTCCACGGTGGAAGCTTCTCTCATTCATCTGCTAACAGTGCTATCTATGACACTTTCTGCCGCCGTCTTGTGAGCATTTGCAAGGCCGTGGTGGTTTCTGTAAATTACAGGCGATCGCCAGAGTACCGATATCCATGTGCCTATGATGATGGCTGGGCTGCGCTTCGGTGGGTTAAATCAAGGACGTGGCTTCAGAGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGTTGGGGATAGCTCTGGTGGTAATATTGTTCATCATGTGGCTGTGAGGGCTGCTGAGGAAGATATTGAGGTGCTAGGCAATATTCTTCTTCACCCATTGTTTGGTGGGGAAAAGCGAACCGAGTCAGAGAAGAAACTGGATGGAAAGTACTTTGTGAAGCTGCAAGATCGTGACTGGTATTGGAGAGCCTTTCTTCCTGAAGGGGCAGATAGAGACCATCCAGCATGTAATCCATTTGGCCCCAAGGGTAAAAGTATTGCAGGACTCAAGTTTCCCAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTCAAGAAGTCTGGCCAAGATGTCAAACTTCTTTACCTGAAGGAGGCCACTATCGGTTTCTACTTCTTGCCGAATAATGATCATTTCTTTTGCCTCATGGAGGAGACAAAGAACTTCGTGAATTCTAACTGTTAA 1035 0.4618 MTGSNEVNLSESKSVVPLNTWVLISNFKLSYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFNRVYQLAPENRARCSIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEYRYPCAYDDGWAALRWVKSRTWLQSGKDSKVHVYLVGDSSGGNIVHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVKLQDRDWYWRAFLPEGADRDHPACNPFGPKGKSIAGLKFPKSLVCVAGLDLLQDWQLEYVEGLKKSGQDVKLLYLKEATIGFYFLPNNDHFFCLMEETKNFVNSNC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2058 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Ssu7g2058 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Ssu7g2058 344 PANTHER GIBBERELLIN RECEPTOR GID1B 2 341 - -
Ssu7g2058 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Ssu7g2058 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Ssu7g2058 344 SUPERFAMILY alpha/beta-Hydrolases 101 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2058 Ssu-Chr7 40786039 40787811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2058 1 342 Carbohydrate Esterase AT3G63010 76.093 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2058 K14493 - gmx:100804463 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2058 7 40786039 40787811 Ssu7g2058 7 40786039 40787811 ECH
Ssu7g2058 7 40786039 40787811 Ssu4g0750 4 11581670 11585450 ECH
Ssu4g1373 4 22663051 22663530 Ssu7g2058 7 40786039 40787811 PCT