Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2055 ATGGGGTCGAAGCCGTGGCTGTACCCCGCTCCAACCTATCGAAATTTGGAAACCTACTGGGACACCGACGAAGACGCGCCTGGCCCTCGCTGTGCCCACACCCTCACCGCCGTCGCCGCCACCAAGTCTCACGGTCCCCGCTTGATCCTCTTCGGCGGCGCCACCGCCATTGAAGGAGGATCTTCCTCCGCTCCCGGCATTCGGTTAGCGGGAGTCACGAATTCCGTCCATTCCTacgacgttcaaactaaaaaatggaCTAGTCTTAAGCCTGCCGGAGAGCCGCCGTCTCCTCGGGCTGCTCATGCCGCCGCTGCAGTTGGCACCATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCTGGGCATTCTACTGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGggTTGTTGTACAAGGGCAAGGACCCGGACCTCGTTATGGCCATGTAATGGACTTGGTTGCTCAGAGATATCTAGTAACTGTCAGCGGAAATGACGGGAAAAGAGTTGTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAAGCTGAACCCAGAAGGTGACAGACCTTCTGCGAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTAAGGGGTGGACGGGCTGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTTATGCATCGTTGTCGTCATGCAGCAGCAGCTGTTGGTATTCATATATTTATCCATGGTGGTCTAAGAGGAGATACACTACTAGATGATTTCTTAGTGGCTGAAAATTCACCATTTCCGCCAGACATTAATTCTCCTGTATTAACGGCTGAGAGAGCTTCACTAGTTACAAGCTCCAAACAAAATCAATCTAACTATAATGTAACAACACCAAATTTGGATGGTGAACCAGACATTCTGTCATCTGGTGGCTCAGGCATGGACAAAAATTCCTTGGAGAAACTGAGGGAAGCATCAGCTGCTGAAGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTGTGCAGGTTATATCAAGTAATCCTGCTGAAGAAACATCTGTATCAGATGACAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACGCAGAGGGAGATGTTCGACTTCATCCTAGAGCTGTTGTAGTTGCTAAGGAGGCTGTAGGTAACCTAGGTGGAATGGTGAGACAATTGTCGCTAgatcaatttgaaaatgaaagcagACGCATGGTTCCCATAAATAATGATTTGCCATATCCTACGAAAAAGTTCACCAGGCAGAAATCTCCTCAGGGTTTACATAAAAAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTACCAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAACTTTGCTATGCTGCCGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTGAAAGCTCCTGTCAAAGTGTTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATCACGTATATTGACTACCTGTTTTTGGGAGATTACGTTGATCGAGGACAGCACAGCTTGGAAACCATTACGTTGCTACTTGCTCTTAAGATTGAATATCCTGAGAATGTTCACTTGATACGTGGAAACCACGAAGCTGCTGACATAAATGCACTGTTTGGTTTTCGTATAGAGTGCATTGAAAGAATGGGTGAAAATGATGGAATATGGGCCTGGACACGATTCAATCAACTTTTTAACTATCTTCCACTAGCTGCtcttattgaaaagaaaattatctgTATGCATGGTGGCATTGGAAGATCTATCCATTCAGTAGAACAGATAGAGAAGCTTGAAAGGCCCATAACGATGGATGCAGGATCTATTGTTTTAATGGACCTTTTATGGTACCTCTTTGtttatctatctatttttttgtcacGTTGCTTCTTATTATATTTGCATTTCCCTTTTTTCCCCCCTTTGAGGGCGATTCTTAATGCAACAGAAAGGTTGCTATTTTATGACCTGGAGATCATGTGTTCAAATCTTGGAAACAATCTCTCTGCTTGTGGGGTTAAGGTTGCAAACATTACCCTCCCCAAACCCCACTTGGTGGGAGCGTTGTGCATTGGGTCACCTTGGATTTTTccattcctttttttattataa 2481 0.4446 MGSKPWLYPAPTYRNLETYWDTDEDAPGPRCAHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVQTKKWTSLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPSLELMHRCRHAAAAVGIHIFIHGGLRGDTLLDDFLVAENSPFPPDINSPVLTAERASLVTSSKQNQSNYNVTTPNLDGEPDILSSGGSGMDKNSLEKLREASAAEAEAASAVWQAVQVISSNPAEETSVSDDNSQAAETVSDGSDAEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPINNDLPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPTNRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIVLMDLLWYLFVYLSIFLSRCFLLYLHFPFFPPLRAILNATERLLFYDLEIMCSNLGNNLSACGVKVANITLPKPHLVGALCIGSPWIFPFLFLL 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2055 826 MobiDBLite consensus disorder prediction 442 468 - -
Ssu7g2055 826 Gene3D - 195 360 IPR015915 GO:0005515
Ssu7g2055 826 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 739 - -
Ssu7g2055 826 SMART pp2a_7 552 808 IPR006186 GO:0016787
Ssu7g2055 826 MobiDBLite consensus disorder prediction 377 398 - -
Ssu7g2055 826 Pfam Calcineurin-like phosphoesterase 580 735 IPR004843 GO:0016787
Ssu7g2055 826 SUPERFAMILY Metallo-dependent phosphatases 533 739 IPR029052 -
Ssu7g2055 826 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 739 - -
Ssu7g2055 826 PIRSF STPPP_BSU1 1 746 IPR012391 GO:0004721|GO:0009742
Ssu7g2055 826 Pfam Galactose oxidase, central domain 45 106 - -
Ssu7g2055 826 Pfam Galactose oxidase, central domain 115 155 - -
Ssu7g2055 826 Gene3D - 513 743 IPR029052 -
Ssu7g2055 826 MobiDBLite consensus disorder prediction 377 418 - -
Ssu7g2055 826 Pfam Serine-threonine protein phosphatase N-terminal domain 531 578 IPR031675 -
Ssu7g2055 826 ProSitePatterns Serine/threonine specific protein phosphatases signature. 649 654 IPR006186 GO:0016787
Ssu7g2055 826 PRINTS Serine/threonine phosphatase family signature 648 672 IPR006186 GO:0016787
Ssu7g2055 826 PRINTS Serine/threonine phosphatase family signature 615 642 IPR006186 GO:0016787
Ssu7g2055 826 PRINTS Serine/threonine phosphatase family signature 686 712 IPR006186 GO:0016787
Ssu7g2055 826 PRINTS Serine/threonine phosphatase family signature 580 607 IPR006186 GO:0016787
Ssu7g2055 826 MobiDBLite consensus disorder prediction 442 460 - -
Ssu7g2055 826 Gene3D - 10 194 IPR015915 GO:0005515
Ssu7g2055 826 SUPERFAMILY Kelch motif 70 356 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2055 Ssu-Chr7 40728521 40740683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2055 581 711 Calmodulin-binding Proteins AT5G63870 39.695 1.76e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2055 K01090 - gmx:100805538 1394.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2055 7 40728521 40740683 Ssu7g2055 7 40728521 40740683 ECH