Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2022 ATGTCTTCTGAAGTAGCGGTGGTGGGTGTGGAGAGCAATGGAAACATTGAAAATACAGAGCAGAACCATCGGCCAGTTTTTGATCATCCTGGGATCACAGGGAAGAAGCTTTCATGGCAAAAGTTGCCAAGAAATGATTCTCTAGACGTGGAATCCCGCAGCTTCCCTAAATCCTCTCATGCCTCTGAAGGGCCATCGATGTCAGTGATTATGCATCTAGCGTTTCAAAGCATCGGAATTGTATACGGTGACATAGGAACATCACCGTTATATGTGTATGCAAGTACCTTCGCGGATGGCATAAAGCACAACGATGACATTTTGGGTGTTCTTTCTTTGATCTTCTATACTATCACTCTCGTTCCTCTCATTAAGTACGTATTCATCGTCTTACGGGCCACTGATAATGGCGATGGAGGGACTTTCGCTTTATACTCTCTGATATGTCGTTATGCCAAAGTGGGGCTTATTCCAAATCAACAACTTGAAGATGCAGAAGTGTCTAACTATAAGTTGGAGTTGCCCAAGAATAACCGTATGAAGAGGGCTTCAAGGCTTAAGTCTAAGCTTGAGAACAGCTACTTTGCCAAGCTCTTCCTCTTGTTAGTTACGATGCTTGGCACTTCAATGGTCATTGGGGATGGTGTTCTCACTCCATGCATCTccgTTTTATCTGCCGTGGGAGGGATCAAGGAAGCTAATTCTTCAATGACTGAGGGTCGGATTGTTGGAATATCCATAGGAATCCTGATATGCCTTTTCATGGTTCAAAGATTCGGAACTGACAAAGTAGGTTACAGTTTTGCTCCTATTATTTGTGTGTGGTTCACCTTCATCGGAGGCATTGGTCTATACAATCTCATCAAGTATGATCCAACTATTGTCAAAGCAATAAATCCAAAATACATTGTAGATTATTTTAGAAGGAACAAGAAAGATGGTTGGATTTCTCTTGGTGGTGTTGTGTTGGCCATAACagGAACTGAAGCACTATTTGCTGATGTTGGACATTTCACAGTCCGGTCCATACAGATAAGCATGTGCTCTGTAACATACCCTGCTCTCATACTTGCCTACACTGGACAAGCCTCCTTTCTTCGCAAAAACAATGATCTCGTTTCAGACACTTTCTACAAGTCCATTCCACATCATTTATATTGGCCAATgtttattattgctattatgGCATCCATCATAGCTTCTCAAGCTATGATCTCCGGGACTTTCTCTATCATCCAACAGTCCCTCTCGCTTGGATGTTTTCCTCGTGTGAAGATAGTGCATACATCAGCCAAGTATGAAGGACAAGTTTACATCCCtgaaatcaatttcattctcaTGATTGCTTGTGTTGCAGTCACAGCTGGATTTAAAACTACCACAAAAATTGGCAATGCTTATGGGATAGCAGTGGTGTTTGTAATGACGCTTACATCTGCTTTGCTAGTGCTAATCATGATCATGATATGGAAGACCCACATACTTTTGGTTATTAGCTATGTGCTTATTGTTGGTTCTGTTGAGCTTATCTATTTAAGCTCGGTGCTATACAAATTCAAAGAAGGAGGCTATCTTCCTCTGGCCTTTGCTGGAGTGCTAATGACCATCATGTACATTTGGAATGATGTGTATCGAAGGAAGTACCATTATGAATTGGATCATAAGATTTCTCCAGAAAAGCTTAAGGAGATTGCTACGGGGACAAACTTAGTTCGAATGCCTGGCCTTGCCATATTCTATTCTGAGCTTGTTCAAGGCATTCCACCCATTTTCAAGCATTATGTGACAAATATTCCTGCACTGCACTCGGTGGTTGTCTTTGTGTCCATCAAATCATTGCCTATCAGCAAAGTTCCTATGGAAGAGAGGTTTTTATTTCGCCAAGTGGAACATGAAGAACTCAATGTGTTTCGATGTGTTGCCAGATATGGATACACGGATGTGCGCAACGAGCAAGAGCCTTTTGAGTATTTGTTGGTTAAAAGGCTGAAGGAATTTATTACTGGTGGATTTTTGGCATCCCAAAGAGAGCTACATGATgataaaactaaagaaaaaataaatggtggtggtgatgatgatgagttTGATGGGGTACAAGAGGGTAGTGATAAAGAGAGAGTGGTGCAAGAGGGTATTGAAAAAGAGGTGGAGGCTATTGAAAAAGCGGTGCGAGGAGGCGTTGTTCACTTGATTGGTGAAAGTGAGGTGGTTGCTAGCAAAGGAGCTGGCATACGGAAAAGGATTCTGATAGATTATGCTTACAATTTCTTGAAAAAGAACTTGAGGCAAAGTGATAAAGTATTTGATATTCCTCATAAGCGTATGGTCAAAGTGGGAATGACTTATGAactttaa 2358 0.4016 MSSEVAVVGVESNGNIENTEQNHRPVFDHPGITGKKLSWQKLPRNDSLDVESRSFPKSSHASEGPSMSVIMHLAFQSIGIVYGDIGTSPLYVYASTFADGIKHNDDILGVLSLIFYTITLVPLIKYVFIVLRATDNGDGGTFALYSLICRYAKVGLIPNQQLEDAEVSNYKLELPKNNRMKRASRLKSKLENSYFAKLFLLLVTMLGTSMVIGDGVLTPCISVLSAVGGIKEANSSMTEGRIVGISIGILICLFMVQRFGTDKVGYSFAPIICVWFTFIGGIGLYNLIKYDPTIVKAINPKYIVDYFRRNKKDGWISLGGVVLAITGTEALFADVGHFTVRSIQISMCSVTYPALILAYTGQASFLRKNNDLVSDTFYKSIPHHLYWPMFIIAIMASIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSAKYEGQVYIPEINFILMIACVAVTAGFKTTTKIGNAYGIAVVFVMTLTSALLVLIMIMIWKTHILLVISYVLIVGSVELIYLSSVLYKFKEGGYLPLAFAGVLMTIMYIWNDVYRRKYHYELDHKISPEKLKEIATGTNLVRMPGLAIFYSELVQGIPPIFKHYVTNIPALHSVVVFVSIKSLPISKVPMEERFLFRQVEHEELNVFRCVARYGYTDVRNEQEPFEYLLVKRLKEFITGGFLASQRELHDDKTKEKINGGGDDDEFDGVQEGSDKERVVQEGIEKEVEAIEKAVRGGVVHLIGESEVVASKGAGIRKRILIDYAYNFLKKNLRQSDKVFDIPHKRMVKVGMTYEL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2022 785 MobiDBLite consensus disorder prediction 13 36 - -
Ssu7g2022 785 PANTHER POTASSIUM TRANSPORTER 38 784 - -
Ssu7g2022 785 TIGRFAM kup: potassium uptake protein 73 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu7g2022 785 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 38 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu7g2022 785 Pfam K+ potassium transporter 74 647 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2022 Ssu-Chr7 40206780 40211697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2022 35 785 Inorganic Solute Cotransporters AT4G13420 56.082 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2022 K03549 - pop:7491314 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2022 7 40206780 40211697 Ssu7g2022 7 40206780 40211697 ECH