Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2021 ATGTCTCCCAACCCTCACTCACTGTCCACAGCTGTAATAATAGAATCGCTTAATCTGTGTCTGgtgaaaaaaactcaaaatcaaaTGGCGCTCAAGCTTTATGGTCTTGCCATGTCCACAAACACCACCCGGGCCATGATCTGTTTCCATGAGAAAGAGGTGGATTTTGAACTTGTTCCAGTCAATGTGTTCGCTACAGAGCATAAGCAGCCTCCTTTTCTCTCCAAGAATCCCTTTGGTTTGATTCCAGTACTTGAAGACGGTGATCTCACTCTTTTTGAGTCCAGAGCCATTACTGCATATGTAGCTGAAAAATTCAAGGAAACGGGACCTGATCTGATCAGGCACAAAGACGCAAAAGAAGCTGCACTGGTGAAGGTGTGGACAGAGGTAGAGTCTCATTACTACGACCCAGCAGTGTCACCCATTATCTACGAGTACTTCGTGGCCCCTTTTCAAGGCAAAGAACCCGACAAGTCAGTGATTGACACCAACGTTGAGAAGCTGAAGGACGTGCTTGATGTGTACGAGGCCAAGCTGAGCAGCACCAAGTACCTTGCCGGGGACTTTTATAGCCTTGCTGATCTTAGCCATGTCTCCGAAACGCACTATTTTATGCAGACCCCTTGTGCTTCAATGATCAATGAGCGTCCCCATGTAAAGGCTTGGTGGGAGGATATCTCTTCTAGGCCCGCTTTCAATAAGGTTGTGGGAGGAATGACTTTTGGTCAGAATCAGGAATGA 744 0.4597 MSPNPHSLSTAVIIESLNLCLVKKTQNQMALKLYGLAMSTNTTRAMICFHEKEVDFELVPVNVFATEHKQPPFLSKNPFGLIPVLEDGDLTLFESRAITAYVAEKFKETGPDLIRHKDAKEAALVKVWTEVESHYYDPAVSPIIYEYFVAPFQGKEPDKSVIDTNVEKLKDVLDVYEAKLSSTKYLAGDFYSLADLSHVSETHYFMQTPCASMINERPHVKAWWEDISSRPAFNKVVGGMTFGQNQE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2021 247 SUPERFAMILY Thioredoxin-like 25 109 IPR036249 -
Ssu7g2021 247 Gene3D - 115 237 - -
Ssu7g2021 247 PANTHER GLUTATHIONE S-TRANSFERASE F13 19 246 - -
Ssu7g2021 247 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 247 IPR010987 -
Ssu7g2021 247 CDD GST_C_Phi 120 237 IPR034347 -
Ssu7g2021 247 SUPERFAMILY GST C-terminal domain-like 101 240 IPR036282 -
Ssu7g2021 247 SFLD Main.5: Phi-like 29 240 - -
Ssu7g2021 247 PANTHER GLUTATHIONE S-TRANSFERASE RHO 19 246 - -
Ssu7g2021 247 SFLD Main (cytGST) 29 240 - -
Ssu7g2021 247 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 29 110 IPR004045 -
Ssu7g2021 247 CDD GST_N_Phi 30 105 - -
Ssu7g2021 247 Pfam Glutathione S-transferase, C-terminal domain 143 231 IPR004046 -
Ssu7g2021 247 Pfam Glutathione S-transferase, N-terminal domain 29 104 IPR004045 -
Ssu7g2021 247 Gene3D Glutaredoxin 29 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2021 Ssu-Chr7 40186925 40188259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2021 29 241 Glutathione S-transferase Gene Family AT3G62760 59.155 7.36e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2021 K00799 - gmx:100815147 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2021 7 40186925 40188259 Ssu7g2021 7 40186925 40188259 ECH