Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2010 ATGGCAGCGTCATCGTCGGAGAAGCAAGTGGTGGTGGTAGGCATAGACGACAGCGAGCAGAGCACGTACGCCCTGAATTGGACTCTGGATCACTTCTTCCCCAGCCCAATCTTCAAGCTCGTTCTCGTTCACTCCAAGCCCACCGCTACTTCTGCTGTGGGCCTCGCCGGCCCAGTTTATGCAGGAGCCGCTGAGATTTTGCCTATTGTAGATTCCGATTTGAGAAAGATTGCCGCCAGAGTTGTCGAAACCGCTAAACAACTTTGCATCAACAAATccGTAAATGATGTGACAGCGGAAGTGGTGGAAGGTGATCCTAgaaatgttctttgtgatgctgTGGATAAGTACCATGCTGCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGgGCGGTTTTAGGTAGTGTGAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATTGTGAAGAAGCCAAAAATCAAACACTGA 489 0.4663 MAASSSEKQVVVVGIDDSEQSTYALNWTLDHFFPSPIFKLVLVHSKPTATSAVGLAGPVYAGAAEILPIVDSDLRKIAARVVETAKQLCINKSVNDVTAEVVEGDPRNVLCDAVDKYHAAMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKIKH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2010 162 PANTHER UNIVERSAL STRESS PROTEIN A-LIKE PROTEIN 6 161 - -
Ssu7g2010 162 PRINTS Universal stress protein signature 116 128 IPR006015 -
Ssu7g2010 162 PRINTS Universal stress protein signature 134 156 IPR006015 -
Ssu7g2010 162 PRINTS Universal stress protein signature 8 26 IPR006015 -
Ssu7g2010 162 Pfam Universal stress protein family 10 156 IPR006016 -
Ssu7g2010 162 PANTHER - 6 161 - -
Ssu7g2010 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 158 - -
Ssu7g2010 162 CDD USP_Like 11 155 - -
Ssu7g2010 162 Gene3D HUPs 2 162 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2010 Ssu-Chr7 39910426 39912521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2010 21 157 Plant U-box Gene Family AT5G57035 28.378 1.07e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2010 - - gmx:100816212 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2010 7 39910426 39912521 Ssu7g2010 7 39910426 39912521 ECH